Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6-1A0A075B5Z8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm18284-201ENSMUST00000172604 624 ntBASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Gm18025-201ENSMUST00000221733 862 ntBASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6-1A0A075B5Z8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6-1A0A075B5Z8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms