Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm27671-201ENSMUST00000183739 66 ntBASIC-3,63□□□□□ -2,99
Scn4aQ9ER60 Gm24396-201ENSMUST00000116905 93 ntBASIC-3,64□□□□□ -2,99
Scn4aQ9ER60 Gm25354-201ENSMUST00000179110 105 ntBASIC-3,66□□□□□ -3
Scn4aQ9ER60 Gm23237-201ENSMUST00000104639 92 ntBASIC-3,7□□□□□ -3
Scn4aQ9ER60 Gm22301-201ENSMUST00000082656 107 ntBASIC-3,72□□□□□ -3
Scn4aQ9ER60 Gm22067-201ENSMUST00000122790 107 ntBASIC-3,75□□□□□ -3,01
Scn4aQ9ER60 Gm22550-201ENSMUST00000179774 107 ntBASIC-3,83□□□□□ -3,02
Scn4aQ9ER60 Gm22060-201ENSMUST00000082558 107 ntBASIC-3,83□□□□□ -3,02
Scn4aQ9ER60 Gm23961-201ENSMUST00000104685 97 ntBASIC-3,84□□□□□ -3,02
Scn4aQ9ER60 Mir7681-201ENSMUST00000184834 72 ntBASIC-3,87□□□□□ -3,03
Scn4aQ9ER60 Gm25521-201ENSMUST00000158393 108 ntBASIC-3,94□□□□□ -3,04
Scn4aQ9ER60 Gm25045-201ENSMUST00000122670 99 ntBASIC-3,96□□□□□ -3,04
Scn4aQ9ER60 Gm25254-201ENSMUST00000157239 104 ntBASIC-3,96□□□□□ -3,04
Scn4aQ9ER60 Gm26259-201ENSMUST00000104778 97 ntBASIC-4□□□□□ -3,05
Scn4aQ9ER60 Gm22069-201ENSMUST00000179911 107 ntBASIC-4□□□□□ -3,05
Scn4aQ9ER60 Gm44303-201ENSMUST00000196348 83 ntBASIC-4□□□□□ -3,05
Scn4aQ9ER60 Gm24194-201ENSMUST00000116805 90 ntBASIC-4,02□□□□□ -3,05
Scn4aQ9ER60 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4,02□□□□□ -3,05
Scn4aQ9ER60 Gm25950-201ENSMUST00000175331 100 ntBASIC-4,04□□□□□ -3,06
Scn4aQ9ER60 Gm25039-201ENSMUST00000082933 107 ntBASIC-4,04□□□□□ -3,06
Scn4aQ9ER60 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4,14□□□□□ -3,07
Scn4aQ9ER60 Gm25132-201ENSMUST00000082652 107 ntBASIC-4,22□□□□□ -3,08
Scn4aQ9ER60 Gm27645-201ENSMUST00000183348 77 ntBASIC-4,36□□□□□ -3,11
Scn4aQ9ER60 Gm25049-201ENSMUST00000158597 73 ntBASIC-4,39□□□□□ -3,11
Scn4aQ9ER60 Gm22943-201ENSMUST00000158564 76 ntBASIC-4,49□□□□□ -3,13
Scn4aQ9ER60 Gm20473-201ENSMUST00000173064 112 ntBASIC-4,58□□□□□ -3,14
Scn4aQ9ER60 Gm23248-201ENSMUST00000083367 108 ntBASIC-4,62□□□□□ -3,15
Scn4aQ9ER60 Gm24531-201ENSMUST00000157945 100 ntBASIC-5,13□□□□□ -3,23
Scn4aQ9ER60 Gm22593-201ENSMUST00000104245 109 ntBASIC-5,21□□□□□ -3,24
Scn4aQ9ER60 Gm23125-201ENSMUST00000157651 106 ntBASIC-5,82□□□□□ -3,34
Scn4aQ9ER60 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5,87□□□□□ -3,35
Scn4aQ9ER60 Gm25886-201ENSMUST00000157780 114 ntBASIC-6,3□□□□□ -3,42
Retrieved 32 of 76,532 protein–RNA pairs in 5,7 ms