Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22550-201ENSMUST00000179774 107 ntBASIC-5.54□□□□□ -3.3
Ccdc40Q8BI79 Gm22060-201ENSMUST00000082558 107 ntBASIC-5.54□□□□□ -3.3
Ccdc40Q8BI79 Gm44385-201ENSMUST00000198781 81 ntBASIC-5.55□□□□□ -3.3
Ccdc40Q8BI79 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.65□□□□□ -3.31
Ccdc40Q8BI79 Gm24396-201ENSMUST00000116905 93 ntBASIC-5.68□□□□□ -3.32
Ccdc40Q8BI79 Gm24194-201ENSMUST00000116805 90 ntBASIC-5.72□□□□□ -3.33
Ccdc40Q8BI79 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5.76□□□□□ -3.33
Ccdc40Q8BI79 Gm44303-201ENSMUST00000196348 83 ntBASIC-5.76□□□□□ -3.33
Ccdc40Q8BI79 Gm23826-201ENSMUST00000157394 119 ntBASIC-5.82□□□□□ -3.34
Ccdc40Q8BI79 Gm25132-201ENSMUST00000082652 107 ntBASIC-5.86□□□□□ -3.35
Ccdc40Q8BI79 Gm25354-201ENSMUST00000179110 105 ntBASIC-5.89□□□□□ -3.35
Ccdc40Q8BI79 Gm25254-201ENSMUST00000157239 104 ntBASIC-5.91□□□□□ -3.36
Ccdc40Q8BI79 n-R5s214-201ENSMUST00000122494 121 ntBASIC-6.02□□□□□ -3.37
Ccdc40Q8BI79 Gm26259-201ENSMUST00000104778 97 ntBASIC-6.03□□□□□ -3.37
Ccdc40Q8BI79 Gm22067-201ENSMUST00000122790 107 ntBASIC-6.08□□□□□ -3.38
Ccdc40Q8BI79 Gm23237-201ENSMUST00000104639 92 ntBASIC-6.16□□□□□ -3.4
Ccdc40Q8BI79 Gm25039-201ENSMUST00000082933 107 ntBASIC-6.27□□□□□ -3.41
Ccdc40Q8BI79 Gm25049-201ENSMUST00000158597 73 ntBASIC-6.44□□□□□ -3.44
Ccdc40Q8BI79 Gm20473-201ENSMUST00000173064 112 ntBASIC-6.44□□□□□ -3.44
Ccdc40Q8BI79 Gm22033-201ENSMUST00000116947 90 ntBASIC-6.51□□□□□ -3.45
Ccdc40Q8BI79 Gm22540-201ENSMUST00000158168 117 ntBASIC-6.76□□□□□ -3.49
Ccdc40Q8BI79 Gm25045-201ENSMUST00000122670 99 ntBASIC-6.84□□□□□ -3.5
Ccdc40Q8BI79 Gm25950-201ENSMUST00000175331 100 ntBASIC-6.85□□□□□ -3.51
Ccdc40Q8BI79 Gm23248-201ENSMUST00000083367 108 ntBASIC-6.98□□□□□ -3.53
Ccdc40Q8BI79 Gm24531-201ENSMUST00000157945 100 ntBASIC-7.4□□□□□ -3.59
Ccdc40Q8BI79 Gm22069-201ENSMUST00000179911 107 ntBASIC-7.45□□□□□ -3.6
Ccdc40Q8BI79 Gm22593-201ENSMUST00000104245 109 ntBASIC-7.56□□□□□ -3.62
Ccdc40Q8BI79 Gm22943-201ENSMUST00000158564 76 ntBASIC-7.82□□□□□ -3.66
Ccdc40Q8BI79 Gm27645-201ENSMUST00000183348 77 ntBASIC-8.47□□□□□ -3.77
Ccdc40Q8BI79 Gm23125-201ENSMUST00000157651 106 ntBASIC-8.58□□□□□ -3.78
Ccdc40Q8BI79 AC160976.1-201ENSMUST00000215092 148 ntBASIC-8.7□□□□□ -3.8
Ccdc40Q8BI79 Gm25886-201ENSMUST00000157780 114 ntBASIC-9.08□□□□□ -3.86
Retrieved 32 of 76,532 protein–RNA pairs in 3.1 ms