Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22550-201ENSMUST00000179774 107 ntBASIC-5,54□□□□□ -3,3
Ccdc40Q8BI79 Gm22060-201ENSMUST00000082558 107 ntBASIC-5,54□□□□□ -3,3
Ccdc40Q8BI79 Gm44385-201ENSMUST00000198781 81 ntBASIC-5,55□□□□□ -3,3
Ccdc40Q8BI79 Gm25521-201ENSMUST00000158393 108 ntBASIC-5,65□□□□□ -3,31
Ccdc40Q8BI79 Gm24396-201ENSMUST00000116905 93 ntBASIC-5,68□□□□□ -3,32
Ccdc40Q8BI79 Gm24194-201ENSMUST00000116805 90 ntBASIC-5,72□□□□□ -3,33
Ccdc40Q8BI79 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5,76□□□□□ -3,33
Ccdc40Q8BI79 Gm44303-201ENSMUST00000196348 83 ntBASIC-5,76□□□□□ -3,33
Ccdc40Q8BI79 Gm23826-201ENSMUST00000157394 119 ntBASIC-5,82□□□□□ -3,34
Ccdc40Q8BI79 Gm25132-201ENSMUST00000082652 107 ntBASIC-5,86□□□□□ -3,35
Ccdc40Q8BI79 Gm25354-201ENSMUST00000179110 105 ntBASIC-5,89□□□□□ -3,35
Ccdc40Q8BI79 Gm25254-201ENSMUST00000157239 104 ntBASIC-5,91□□□□□ -3,36
Ccdc40Q8BI79 n-R5s214-201ENSMUST00000122494 121 ntBASIC-6,02□□□□□ -3,37
Ccdc40Q8BI79 Gm26259-201ENSMUST00000104778 97 ntBASIC-6,03□□□□□ -3,37
Ccdc40Q8BI79 Gm22067-201ENSMUST00000122790 107 ntBASIC-6,08□□□□□ -3,38
Ccdc40Q8BI79 Gm23237-201ENSMUST00000104639 92 ntBASIC-6,16□□□□□ -3,4
Ccdc40Q8BI79 Gm25039-201ENSMUST00000082933 107 ntBASIC-6,27□□□□□ -3,41
Ccdc40Q8BI79 Gm25049-201ENSMUST00000158597 73 ntBASIC-6,44□□□□□ -3,44
Ccdc40Q8BI79 Gm20473-201ENSMUST00000173064 112 ntBASIC-6,44□□□□□ -3,44
Ccdc40Q8BI79 Gm22033-201ENSMUST00000116947 90 ntBASIC-6,51□□□□□ -3,45
Ccdc40Q8BI79 Gm22540-201ENSMUST00000158168 117 ntBASIC-6,76□□□□□ -3,49
Ccdc40Q8BI79 Gm25045-201ENSMUST00000122670 99 ntBASIC-6,84□□□□□ -3,5
Ccdc40Q8BI79 Gm25950-201ENSMUST00000175331 100 ntBASIC-6,85□□□□□ -3,51
Ccdc40Q8BI79 Gm23248-201ENSMUST00000083367 108 ntBASIC-6,98□□□□□ -3,53
Ccdc40Q8BI79 Gm24531-201ENSMUST00000157945 100 ntBASIC-7,4□□□□□ -3,59
Ccdc40Q8BI79 Gm22069-201ENSMUST00000179911 107 ntBASIC-7,45□□□□□ -3,6
Ccdc40Q8BI79 Gm22593-201ENSMUST00000104245 109 ntBASIC-7,56□□□□□ -3,62
Ccdc40Q8BI79 Gm22943-201ENSMUST00000158564 76 ntBASIC-7,82□□□□□ -3,66
Ccdc40Q8BI79 Gm27645-201ENSMUST00000183348 77 ntBASIC-8,47□□□□□ -3,77
Ccdc40Q8BI79 Gm23125-201ENSMUST00000157651 106 ntBASIC-8,58□□□□□ -3,78
Ccdc40Q8BI79 AC160976.1-201ENSMUST00000215092 148 ntBASIC-8,7□□□□□ -3,8
Ccdc40Q8BI79 Gm25886-201ENSMUST00000157780 114 ntBASIC-9,08□□□□□ -3,86
Retrieved 32 of 76,532 protein–RNA pairs in 88 ms