Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.68□□□□□ -3
Vamp1Q62442 Mir6395-201ENSMUST00000183885 91 ntBASIC-3.68□□□□□ -3
Vamp1Q62442 Gm23066-201ENSMUST00000158237 71 ntBASIC-3.7□□□□□ -3
Vamp1Q62442 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.75□□□□□ -3.01
Vamp1Q62442 Gm24631-201ENSMUST00000122765 81 ntBASIC-3.79□□□□□ -3.02
Vamp1Q62442 Mir493-201ENSMUST00000103837 83 ntBASIC-3.82□□□□□ -3.02
Vamp1Q62442 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.82□□□□□ -3.02
Vamp1Q62442 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.83□□□□□ -3.02
Vamp1Q62442 AC160976.1-201ENSMUST00000215092 148 ntBASIC-3.87□□□□□ -3.03
Vamp1Q62442 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.88□□□□□ -3.03
Vamp1Q62442 Gm20473-201ENSMUST00000173064 112 ntBASIC-3.91□□□□□ -3.04
Vamp1Q62442 Gm24531-201ENSMUST00000157945 100 ntBASIC-3.92□□□□□ -3.04
Vamp1Q62442 Mir154-201ENSMUST00000083514 66 ntBASIC-4□□□□□ -3.05
Vamp1Q62442 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-4.12□□□□□ -3.07
Vamp1Q62442 Gm25867-201ENSMUST00000158254 103 ntBASIC-4.2□□□□□ -3.08
Vamp1Q62442 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.21□□□□□ -3.08
Vamp1Q62442 Mir1912-201ENSMUST00000175298 87 ntBASIC-4.22□□□□□ -3.08
Vamp1Q62442 Gm26008-201ENSMUST00000158797 99 ntBASIC-4.32□□□□□ -3.1
Vamp1Q62442 Gm25521-201ENSMUST00000158393 108 ntBASIC-4.36□□□□□ -3.11
Vamp1Q62442 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.37□□□□□ -3.11
Vamp1Q62442 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.37□□□□□ -3.11
Vamp1Q62442 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.43□□□□□ -3.12
Vamp1Q62442 Gm22593-201ENSMUST00000104245 109 ntBASIC-4.45□□□□□ -3.12
Vamp1Q62442 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.49□□□□□ -3.13
Vamp1Q62442 Gm23210-201ENSMUST00000158668 98 ntBASIC-4.77□□□□□ -3.17
Vamp1Q62442 Gm27671-201ENSMUST00000183739 66 ntBASIC-4.82□□□□□ -3.18
Vamp1Q62442 Gm25886-201ENSMUST00000157780 114 ntBASIC-4.87□□□□□ -3.19
Vamp1Q62442 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.97□□□□□ -3.21
Vamp1Q62442 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.14□□□□□ -3.23
Vamp1Q62442 Gm23125-201ENSMUST00000157651 106 ntBASIC-5.95□□□□□ -3.36
Vamp1Q62442 Gm25039-201ENSMUST00000082933 107 ntBASIC-5.99□□□□□ -3.37
Vamp1Q62442 Gm23248-201ENSMUST00000083367 108 ntBASIC-6.14□□□□□ -3.39
Retrieved 32 of 76,532 protein–RNA pairs in 162 ms