Protein–RNA interactions for Protein: Q62226

Shh, Sonic hedgehog protein, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShhQ62226 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.38□□□□□ -2.63
ShhQ62226 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.41□□□□□ -2.64
ShhQ62226 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.43□□□□□ -2.64
ShhQ62226 Mir1912-201ENSMUST00000175298 87 ntBASIC-1.44□□□□□ -2.64
ShhQ62226 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.45□□□□□ -2.64
ShhQ62226 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.45□□□□□ -2.64
ShhQ62226 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.46□□□□□ -2.64
ShhQ62226 Mir154-201ENSMUST00000083514 66 ntBASIC-1.47□□□□□ -2.64
ShhQ62226 Gm25254-201ENSMUST00000157239 104 ntBASIC-1.48□□□□□ -2.65
ShhQ62226 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.5□□□□□ -2.65
ShhQ62226 Gm25049-201ENSMUST00000158597 73 ntBASIC-1.52□□□□□ -2.65
ShhQ62226 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.54□□□□□ -2.66
ShhQ62226 Mir335-201ENSMUST00000083567 98 ntBASIC-1.55□□□□□ -2.66
ShhQ62226 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.56□□□□□ -2.66
ShhQ62226 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.56□□□□□ -2.66
ShhQ62226 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.57□□□□□ -2.66
ShhQ62226 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.59□□□□□ -2.66
ShhQ62226 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.63□□□□□ -2.67
ShhQ62226 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.64□□□□□ -2.67
ShhQ62226 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.65□□□□□ -2.67
ShhQ62226 Mir351-201ENSMUST00000083569 99 ntBASIC-1.65□□□□□ -2.67
ShhQ62226 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.66□□□□□ -2.68
ShhQ62226 Gm25521-201ENSMUST00000158393 108 ntBASIC-1.67□□□□□ -2.68
ShhQ62226 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.69□□□□□ -2.68
ShhQ62226 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.7□□□□□ -2.68
ShhQ62226 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.78□□□□□ -2.69
ShhQ62226 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.83□□□□□ -2.7
ShhQ62226 Gm23125-201ENSMUST00000157651 106 ntBASIC-1.96□□□□□ -2.72
ShhQ62226 Gm25039-201ENSMUST00000082933 107 ntBASIC-1.99□□□□□ -2.73
ShhQ62226 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.02□□□□□ -2.73
ShhQ62226 Gm23248-201ENSMUST00000083367 108 ntBASIC-2.02□□□□□ -2.73
ShhQ62226 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.17□□□□□ -2.76
Retrieved 32 of 76,532 protein–RNA pairs in 144.5 ms