Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.8□□□□□ -2.54
Ecm1Q61508 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.82□□□□□ -2.54
Ecm1Q61508 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.84□□□□□ -2.54
Ecm1Q61508 Gm22402-201ENSMUST00000174920 110 ntBASIC-0.86□□□□□ -2.55
Ecm1Q61508 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.87□□□□□ -2.55
Ecm1Q61508 Snord8-201ENSMUST00000175303 110 ntBASIC-0.88□□□□□ -2.55
Ecm1Q61508 Gm27995-201ENSMUST00000184402 100 ntBASIC-0.9□□□□□ -2.55
Ecm1Q61508 n-R5s214-201ENSMUST00000122494 121 ntBASIC-0.97□□□□□ -2.56
Ecm1Q61508 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.99□□□□□ -2.57
Ecm1Q61508 Gm22183-201ENSMUST00000175420 73 ntBASIC-1□□□□□ -2.57
Ecm1Q61508 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.02□□□□□ -2.57
Ecm1Q61508 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.02□□□□□ -2.57
Ecm1Q61508 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.04□□□□□ -2.58
Ecm1Q61508 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.06□□□□□ -2.58
Ecm1Q61508 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.08□□□□□ -2.58
Ecm1Q61508 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.08□□□□□ -2.58
Ecm1Q61508 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.14□□□□□ -2.59
Ecm1Q61508 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.14□□□□□ -2.59
Ecm1Q61508 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.22□□□□□ -2.6
Ecm1Q61508 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.25□□□□□ -2.61
Ecm1Q61508 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.28□□□□□ -2.61
Ecm1Q61508 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.3□□□□□ -2.62
Ecm1Q61508 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.43□□□□□ -2.64
Ecm1Q61508 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.44□□□□□ -2.64
Ecm1Q61508 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.45□□□□□ -2.64
Ecm1Q61508 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.46□□□□□ -2.64
Ecm1Q61508 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
Ecm1Q61508 Mir335-201ENSMUST00000083567 98 ntBASIC-1.53□□□□□ -2.65
Ecm1Q61508 Mir351-201ENSMUST00000083569 99 ntBASIC-1.63□□□□□ -2.67
Ecm1Q61508 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.66□□□□□ -2.68
Ecm1Q61508 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.74□□□□□ -2.69
Ecm1Q61508 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.2□□□□□ -2.76
Retrieved 32 of 76,532 protein–RNA pairs in 228 ms