Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm24396-201ENSMUST00000116905 93 ntBASIC-3.8□□□□□ -3.02
Ccdc88aQ5SNZ0 Gm23961-201ENSMUST00000104685 97 ntBASIC-3.85□□□□□ -3.03
Ccdc88aQ5SNZ0 Gm25354-201ENSMUST00000179110 105 ntBASIC-3.85□□□□□ -3.03
Ccdc88aQ5SNZ0 Gm22540-201ENSMUST00000158168 117 ntBASIC-3.87□□□□□ -3.03
Ccdc88aQ5SNZ0 Gm22033-201ENSMUST00000116947 90 ntBASIC-3.89□□□□□ -3.03
Ccdc88aQ5SNZ0 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.91□□□□□ -3.04
Ccdc88aQ5SNZ0 Gm26259-201ENSMUST00000104778 97 ntBASIC-3.95□□□□□ -3.04
Ccdc88aQ5SNZ0 Gm23237-201ENSMUST00000104639 92 ntBASIC-3.96□□□□□ -3.04
Ccdc88aQ5SNZ0 Gm22067-201ENSMUST00000122790 107 ntBASIC-4.07□□□□□ -3.06
Ccdc88aQ5SNZ0 Mir7681-201ENSMUST00000184834 72 ntBASIC-4.07□□□□□ -3.06
Ccdc88aQ5SNZ0 Gm25132-201ENSMUST00000082652 107 ntBASIC-4.08□□□□□ -3.06
Ccdc88aQ5SNZ0 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4.09□□□□□ -3.06
Ccdc88aQ5SNZ0 Gm27671-201ENSMUST00000183739 66 ntBASIC-4.18□□□□□ -3.08
Ccdc88aQ5SNZ0 Gm25521-201ENSMUST00000158393 108 ntBASIC-4.2□□□□□ -3.08
Ccdc88aQ5SNZ0 Gm25950-201ENSMUST00000175331 100 ntBASIC-4.26□□□□□ -3.09
Ccdc88aQ5SNZ0 Gm44303-201ENSMUST00000196348 83 ntBASIC-4.28□□□□□ -3.09
Ccdc88aQ5SNZ0 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.3□□□□□ -3.1
Ccdc88aQ5SNZ0 Gm25045-201ENSMUST00000122670 99 ntBASIC-4.37□□□□□ -3.11
Ccdc88aQ5SNZ0 Gm22069-201ENSMUST00000179911 107 ntBASIC-4.43□□□□□ -3.12
Ccdc88aQ5SNZ0 Gm23210-201ENSMUST00000158668 98 ntBASIC-4.47□□□□□ -3.13
Ccdc88aQ5SNZ0 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.49□□□□□ -3.13
Ccdc88aQ5SNZ0 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.54□□□□□ -3.14
Ccdc88aQ5SNZ0 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.55□□□□□ -3.14
Ccdc88aQ5SNZ0 Gm22943-201ENSMUST00000158564 76 ntBASIC-4.85□□□□□ -3.19
Ccdc88aQ5SNZ0 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.94□□□□□ -3.2
Ccdc88aQ5SNZ0 Gm27645-201ENSMUST00000183348 77 ntBASIC-5□□□□□ -3.21
Ccdc88aQ5SNZ0 Gm22593-201ENSMUST00000104245 109 ntBASIC-5.07□□□□□ -3.22
Ccdc88aQ5SNZ0 Gm24531-201ENSMUST00000157945 100 ntBASIC-5.1□□□□□ -3.23
Ccdc88aQ5SNZ0 Gm23248-201ENSMUST00000083367 108 ntBASIC-5.17□□□□□ -3.24
Ccdc88aQ5SNZ0 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5.86□□□□□ -3.35
Ccdc88aQ5SNZ0 Gm23125-201ENSMUST00000157651 106 ntBASIC-6.17□□□□□ -3.4
Ccdc88aQ5SNZ0 Gm25886-201ENSMUST00000157780 114 ntBASIC-6.23□□□□□ -3.41
Retrieved 32 of 76,532 protein–RNA pairs in 132.4 ms