Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm24396-201ENSMUST00000116905 93 ntBASIC-3,8□□□□□ -3,02
Ccdc88aQ5SNZ0 Gm23961-201ENSMUST00000104685 97 ntBASIC-3,85□□□□□ -3,03
Ccdc88aQ5SNZ0 Gm25354-201ENSMUST00000179110 105 ntBASIC-3,85□□□□□ -3,03
Ccdc88aQ5SNZ0 Gm22540-201ENSMUST00000158168 117 ntBASIC-3,87□□□□□ -3,03
Ccdc88aQ5SNZ0 Gm22033-201ENSMUST00000116947 90 ntBASIC-3,89□□□□□ -3,03
Ccdc88aQ5SNZ0 Gm24194-201ENSMUST00000116805 90 ntBASIC-3,91□□□□□ -3,04
Ccdc88aQ5SNZ0 Gm26259-201ENSMUST00000104778 97 ntBASIC-3,95□□□□□ -3,04
Ccdc88aQ5SNZ0 Gm23237-201ENSMUST00000104639 92 ntBASIC-3,96□□□□□ -3,04
Ccdc88aQ5SNZ0 Gm22067-201ENSMUST00000122790 107 ntBASIC-4,07□□□□□ -3,06
Ccdc88aQ5SNZ0 Mir7681-201ENSMUST00000184834 72 ntBASIC-4,07□□□□□ -3,06
Ccdc88aQ5SNZ0 Gm25132-201ENSMUST00000082652 107 ntBASIC-4,08□□□□□ -3,06
Ccdc88aQ5SNZ0 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-4,09□□□□□ -3,06
Ccdc88aQ5SNZ0 Gm27671-201ENSMUST00000183739 66 ntBASIC-4,18□□□□□ -3,08
Ccdc88aQ5SNZ0 Gm25521-201ENSMUST00000158393 108 ntBASIC-4,2□□□□□ -3,08
Ccdc88aQ5SNZ0 Gm25950-201ENSMUST00000175331 100 ntBASIC-4,26□□□□□ -3,09
Ccdc88aQ5SNZ0 Gm44303-201ENSMUST00000196348 83 ntBASIC-4,28□□□□□ -3,09
Ccdc88aQ5SNZ0 Gm25049-201ENSMUST00000158597 73 ntBASIC-4,3□□□□□ -3,1
Ccdc88aQ5SNZ0 Gm25045-201ENSMUST00000122670 99 ntBASIC-4,37□□□□□ -3,11
Ccdc88aQ5SNZ0 Gm22069-201ENSMUST00000179911 107 ntBASIC-4,43□□□□□ -3,12
Ccdc88aQ5SNZ0 Gm23210-201ENSMUST00000158668 98 ntBASIC-4,47□□□□□ -3,13
Ccdc88aQ5SNZ0 Gm25039-201ENSMUST00000082933 107 ntBASIC-4,49□□□□□ -3,13
Ccdc88aQ5SNZ0 Gm20473-201ENSMUST00000173064 112 ntBASIC-4,54□□□□□ -3,14
Ccdc88aQ5SNZ0 Gm25254-201ENSMUST00000157239 104 ntBASIC-4,55□□□□□ -3,14
Ccdc88aQ5SNZ0 Gm22943-201ENSMUST00000158564 76 ntBASIC-4,85□□□□□ -3,19
Ccdc88aQ5SNZ0 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4,94□□□□□ -3,2
Ccdc88aQ5SNZ0 Gm27645-201ENSMUST00000183348 77 ntBASIC-5□□□□□ -3,21
Ccdc88aQ5SNZ0 Gm22593-201ENSMUST00000104245 109 ntBASIC-5,07□□□□□ -3,22
Ccdc88aQ5SNZ0 Gm24531-201ENSMUST00000157945 100 ntBASIC-5,1□□□□□ -3,23
Ccdc88aQ5SNZ0 Gm23248-201ENSMUST00000083367 108 ntBASIC-5,17□□□□□ -3,24
Ccdc88aQ5SNZ0 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5,86□□□□□ -3,35
Ccdc88aQ5SNZ0 Gm23125-201ENSMUST00000157651 106 ntBASIC-6,17□□□□□ -3,4
Ccdc88aQ5SNZ0 Gm25886-201ENSMUST00000157780 114 ntBASIC-6,23□□□□□ -3,41
Retrieved 32 of 76,532 protein–RNA pairs in 5,9 ms