Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm22060-201ENSMUST00000082558 107 ntBASIC-5,66□□□□□ -3,32
Trav15-1-dv6-1Q5R1D2 Gm23826-201ENSMUST00000157394 119 ntBASIC-5,72□□□□□ -3,33
Trav15-1-dv6-1Q5R1D2 Gm27671-201ENSMUST00000183739 66 ntBASIC-5,75□□□□□ -3,33
Trav15-1-dv6-1Q5R1D2 Gm24194-201ENSMUST00000116805 90 ntBASIC-5,81□□□□□ -3,34
Trav15-1-dv6-1Q5R1D2 Gm25521-201ENSMUST00000158393 108 ntBASIC-5,81□□□□□ -3,34
Trav15-1-dv6-1Q5R1D2 Gm25354-201ENSMUST00000179110 105 ntBASIC-5,84□□□□□ -3,34
Trav15-1-dv6-1Q5R1D2 Gm44385-201ENSMUST00000198781 81 ntBASIC-5,9□□□□□ -3,35
Trav15-1-dv6-1Q5R1D2 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-5,91□□□□□ -3,36
Trav15-1-dv6-1Q5R1D2 Gm44303-201ENSMUST00000196348 83 ntBASIC-5,94□□□□□ -3,36
Trav15-1-dv6-1Q5R1D2 Gm25132-201ENSMUST00000082652 107 ntBASIC-5,94□□□□□ -3,36
Trav15-1-dv6-1Q5R1D2 Gm22067-201ENSMUST00000122790 107 ntBASIC-5,99□□□□□ -3,37
Trav15-1-dv6-1Q5R1D2 Gm23210-201ENSMUST00000158668 98 ntBASIC-6,06□□□□□ -3,38
Trav15-1-dv6-1Q5R1D2 Gm23237-201ENSMUST00000104639 92 ntBASIC-6,07□□□□□ -3,38
Trav15-1-dv6-1Q5R1D2 Gm26259-201ENSMUST00000104778 97 ntBASIC-6,11□□□□□ -3,39
Trav15-1-dv6-1Q5R1D2 Gm25254-201ENSMUST00000157239 104 ntBASIC-6,27□□□□□ -3,41
Trav15-1-dv6-1Q5R1D2 Gm22033-201ENSMUST00000116947 90 ntBASIC-6,34□□□□□ -3,42
Trav15-1-dv6-1Q5R1D2 Gm20473-201ENSMUST00000173064 112 ntBASIC-6,55□□□□□ -3,46
Trav15-1-dv6-1Q5R1D2 Gm22540-201ENSMUST00000158168 117 ntBASIC-6,6□□□□□ -3,47
Trav15-1-dv6-1Q5R1D2 Gm25049-201ENSMUST00000158597 73 ntBASIC-6,63□□□□□ -3,47
Trav15-1-dv6-1Q5R1D2 Gm25045-201ENSMUST00000122670 99 ntBASIC-6,68□□□□□ -3,48
Trav15-1-dv6-1Q5R1D2 Gm25950-201ENSMUST00000175331 100 ntBASIC-6,77□□□□□ -3,49
Trav15-1-dv6-1Q5R1D2 n-R5s214-201ENSMUST00000122494 121 ntBASIC-6,79□□□□□ -3,5
Trav15-1-dv6-1Q5R1D2 Gm25039-201ENSMUST00000082933 107 ntBASIC-6,81□□□□□ -3,5
Trav15-1-dv6-1Q5R1D2 Gm22069-201ENSMUST00000179911 107 ntBASIC-7,28□□□□□ -3,57
Trav15-1-dv6-1Q5R1D2 Gm23248-201ENSMUST00000083367 108 ntBASIC-7,37□□□□□ -3,59
Trav15-1-dv6-1Q5R1D2 Gm24531-201ENSMUST00000157945 100 ntBASIC-7,54□□□□□ -3,62
Trav15-1-dv6-1Q5R1D2 Gm22943-201ENSMUST00000158564 76 ntBASIC-7,69□□□□□ -3,64
Trav15-1-dv6-1Q5R1D2 Gm22593-201ENSMUST00000104245 109 ntBASIC-7,7□□□□□ -3,64
Trav15-1-dv6-1Q5R1D2 Gm27645-201ENSMUST00000183348 77 ntBASIC-8,3□□□□□ -3,74
Trav15-1-dv6-1Q5R1D2 AC160976.1-201ENSMUST00000215092 148 ntBASIC-8,76□□□□□ -3,81
Trav15-1-dv6-1Q5R1D2 Gm23125-201ENSMUST00000157651 106 ntBASIC-8,85□□□□□ -3,83
Trav15-1-dv6-1Q5R1D2 Gm25886-201ENSMUST00000157780 114 ntBASIC-9,22□□□□□ -3,89
Retrieved 32 of 76,532 protein–RNA pairs in 5,3 ms