Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mir6481-201ENSMUST00000184617 110 ntBASIC-8.81□□□□□ -3.82
Ccdc88bQ4QRL3 Gm44387-201ENSMUST00000196298 145 ntBASIC-8.81□□□□□ -3.82
Ccdc88bQ4QRL3 Gm23852-201ENSMUST00000158376 77 ntBASIC-8.83□□□□□ -3.82
Ccdc88bQ4QRL3 Gm24482-201ENSMUST00000117005 93 ntBASIC-8.95□□□□□ -3.84
Ccdc88bQ4QRL3 Gm24531-201ENSMUST00000157945 100 ntBASIC-8.96□□□□□ -3.84
Ccdc88bQ4QRL3 Mir467g-201ENSMUST00000116906 120 ntBASIC-9.31□□□□□ -3.9
Ccdc88bQ4QRL3 Gm22381-201ENSMUST00000158186 107 ntBASIC-9.31□□□□□ -3.9
Ccdc88bQ4QRL3 Gm22709-201ENSMUST00000116893 111 ntBASIC-9.33□□□□□ -3.9
Ccdc88bQ4QRL3 mt-Td-201ENSMUST00000082404 70 ntBASIC-9.35□□□□□ -3.91
Ccdc88bQ4QRL3 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-9.36□□□□□ -3.91
Ccdc88bQ4QRL3 Gm25950-201ENSMUST00000175331 100 ntBASIC-9.36□□□□□ -3.91
Ccdc88bQ4QRL3 Gm23125-201ENSMUST00000157651 106 ntBASIC-9.45□□□□□ -3.92
Ccdc88bQ4QRL3 Gm25315-201ENSMUST00000116823 121 ntBASIC-9.49□□□□□ -3.93
Ccdc88bQ4QRL3 Gm22540-201ENSMUST00000158168 117 ntBASIC-9.49□□□□□ -3.93
Ccdc88bQ4QRL3 Gm24586-201ENSMUST00000116695 89 ntBASIC-9.6□□□□□ -3.95
Ccdc88bQ4QRL3 Gm22033-201ENSMUST00000116947 90 ntBASIC-9.66□□□□□ -3.96
Ccdc88bQ4QRL3 AC160976.1-201ENSMUST00000215092 148 ntBASIC-9.91□□□□□ -4
Ccdc88bQ4QRL3 Gm25045-201ENSMUST00000122670 99 ntBASIC-9.95□□□□□ -4
Ccdc88bQ4QRL3 Gm25509-201ENSMUST00000116985 106 ntBASIC-9.97□□□□□ -4
Ccdc88bQ4QRL3 Mir669l-201ENSMUST00000103771 98 ntBASIC-10.04□□□□□ -4.02
Ccdc88bQ4QRL3 Gm22195-201ENSMUST00000116861 108 ntBASIC-10.1□□□□□ -4.03
Ccdc88bQ4QRL3 Gm23653-201ENSMUST00000116751 97 ntBASIC-10.2□□□□□ -4.04
Ccdc88bQ4QRL3 Mir7116-201ENSMUST00000195956 70 ntBASIC-10.26□□□□□ -4.05
Ccdc88bQ4QRL3 Gm25428-201ENSMUST00000157608 114 ntBASIC-10.33□□□□□ -4.06
Ccdc88bQ4QRL3 Gm24590-201ENSMUST00000116699 119 ntBASIC-10.55□□□□□ -4.1
Ccdc88bQ4QRL3 Gm22069-201ENSMUST00000179911 107 ntBASIC-10.68□□□□□ -4.12
Ccdc88bQ4QRL3 Gm25886-201ENSMUST00000157780 114 ntBASIC-10.81□□□□□ -4.14
Ccdc88bQ4QRL3 Gm44385-201ENSMUST00000198781 81 ntBASIC-11.09□□□□□ -4.18
Ccdc88bQ4QRL3 AL929417.1-201ENSMUST00000214901 124 ntBASIC-11.13□□□□□ -4.19
Ccdc88bQ4QRL3 Gm22943-201ENSMUST00000158564 76 ntBASIC-11.24□□□□□ -4.21
Ccdc88bQ4QRL3 Gm44353-201ENSMUST00000200618 138 ntBASIC-11.91□□□□□ -4.32
Ccdc88bQ4QRL3 Gm27645-201ENSMUST00000183348 77 ntBASIC-12.94□□□□□ -4.48
Retrieved 32 of 76,532 protein–RNA pairs in 278.6 ms