Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm27882-201ENSMUST00000184904 74 ntBASIC-3.19□□□□□ -2.92
Trim40Q3UWA4 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.21□□□□□ -2.92
Trim40Q3UWA4 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.24□□□□□ -2.93
Trim40Q3UWA4 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-3.24□□□□□ -2.93
Trim40Q3UWA4 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.25□□□□□ -2.93
Trim40Q3UWA4 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.26□□□□□ -2.93
Trim40Q3UWA4 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.26□□□□□ -2.93
Trim40Q3UWA4 Mir154-201ENSMUST00000083514 66 ntBASIC-3.26□□□□□ -2.93
Trim40Q3UWA4 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.27□□□□□ -2.93
Trim40Q3UWA4 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.29□□□□□ -2.94
Trim40Q3UWA4 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.36□□□□□ -2.95
Trim40Q3UWA4 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.36□□□□□ -2.95
Trim40Q3UWA4 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.36□□□□□ -2.95
Trim40Q3UWA4 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.4□□□□□ -2.95
Trim40Q3UWA4 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.41□□□□□ -2.96
Trim40Q3UWA4 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.45□□□□□ -2.96
Trim40Q3UWA4 Gm20473-201ENSMUST00000173064 112 ntBASIC-3.64□□□□□ -2.99
Trim40Q3UWA4 Gm25521-201ENSMUST00000158393 108 ntBASIC-3.65□□□□□ -2.99
Trim40Q3UWA4 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.66□□□□□ -3
Trim40Q3UWA4 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.77□□□□□ -3.01
Trim40Q3UWA4 Gm25049-201ENSMUST00000158597 73 ntBASIC-3.8□□□□□ -3.02
Trim40Q3UWA4 Gm24531-201ENSMUST00000157945 100 ntBASIC-3.81□□□□□ -3.02
Trim40Q3UWA4 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.84□□□□□ -3.02
Trim40Q3UWA4 Gm25254-201ENSMUST00000157239 104 ntBASIC-3.91□□□□□ -3.04
Trim40Q3UWA4 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.96□□□□□ -3.04
Trim40Q3UWA4 Gm22593-201ENSMUST00000104245 109 ntBASIC-4.2□□□□□ -3.08
Trim40Q3UWA4 AC160976.1-201ENSMUST00000215092 148 ntBASIC-4.25□□□□□ -3.09
Trim40Q3UWA4 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.56□□□□□ -3.14
Trim40Q3UWA4 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.62□□□□□ -3.15
Trim40Q3UWA4 Gm25886-201ENSMUST00000157780 114 ntBASIC-4.8□□□□□ -3.18
Trim40Q3UWA4 Gm23248-201ENSMUST00000083367 108 ntBASIC-4.8□□□□□ -3.18
Trim40Q3UWA4 Gm23125-201ENSMUST00000157651 106 ntBASIC-5.11□□□□□ -3.23
Retrieved 32 of 76,532 protein–RNA pairs in 161.7 ms