Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.7□□□□□ -2.68
Rnf40Q3U319 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
Rnf40Q3U319 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.72□□□□□ -2.68
Rnf40Q3U319 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.76□□□□□ -2.69
Rnf40Q3U319 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.79□□□□□ -2.7
Rnf40Q3U319 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.85□□□□□ -2.71
Rnf40Q3U319 Mir485-201ENSMUST00000093620 73 ntBASIC-1.85□□□□□ -2.71
Rnf40Q3U319 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.87□□□□□ -2.71
Rnf40Q3U319 Mir154-201ENSMUST00000083514 66 ntBASIC-1.88□□□□□ -2.71
Rnf40Q3U319 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.95□□□□□ -2.72
Rnf40Q3U319 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.96□□□□□ -2.72
Rnf40Q3U319 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.99□□□□□ -2.73
Rnf40Q3U319 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.04□□□□□ -2.74
Rnf40Q3U319 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.11□□□□□ -2.75
Rnf40Q3U319 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.12□□□□□ -2.75
Rnf40Q3U319 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.17□□□□□ -2.76
Rnf40Q3U319 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.19□□□□□ -2.76
Rnf40Q3U319 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.19□□□□□ -2.76
Rnf40Q3U319 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.21□□□□□ -2.76
Rnf40Q3U319 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.25□□□□□ -2.77
Rnf40Q3U319 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.27□□□□□ -2.77
Rnf40Q3U319 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.3□□□□□ -2.78
Rnf40Q3U319 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.32□□□□□ -2.78
Rnf40Q3U319 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.34□□□□□ -2.78
Rnf40Q3U319 Mir335-201ENSMUST00000083567 98 ntBASIC-2.41□□□□□ -2.8
Rnf40Q3U319 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.56□□□□□ -2.82
Rnf40Q3U319 Mir351-201ENSMUST00000083569 99 ntBASIC-2.57□□□□□ -2.82
Rnf40Q3U319 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.59□□□□□ -2.82
Rnf40Q3U319 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.74□□□□□ -2.85
Rnf40Q3U319 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.77□□□□□ -2.85
Rnf40Q3U319 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.81□□□□□ -2.86
Rnf40Q3U319 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.19□□□□□ -2.92
Retrieved 32 of 76,532 protein–RNA pairs in 3.6 ms