Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.26□□□□□ -2.77
Ddb1Q3U1J4 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.26□□□□□ -2.77
Ddb1Q3U1J4 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.28□□□□□ -2.77
Ddb1Q3U1J4 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.3□□□□□ -2.78
Ddb1Q3U1J4 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.31□□□□□ -2.78
Ddb1Q3U1J4 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.31□□□□□ -2.78
Ddb1Q3U1J4 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.33□□□□□ -2.78
Ddb1Q3U1J4 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.37□□□□□ -2.79
Ddb1Q3U1J4 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.37□□□□□ -2.79
Ddb1Q3U1J4 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.38□□□□□ -2.79
Ddb1Q3U1J4 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.4□□□□□ -2.79
Ddb1Q3U1J4 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
Ddb1Q3U1J4 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.42□□□□□ -2.8
Ddb1Q3U1J4 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.43□□□□□ -2.8
Ddb1Q3U1J4 Mir154-201ENSMUST00000083514 66 ntBASIC-2.43□□□□□ -2.8
Ddb1Q3U1J4 Gm23125-201ENSMUST00000157651 106 ntBASIC-2.45□□□□□ -2.8
Ddb1Q3U1J4 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.45□□□□□ -2.8
Ddb1Q3U1J4 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.49□□□□□ -2.81
Ddb1Q3U1J4 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.61□□□□□ -2.83
Ddb1Q3U1J4 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.78□□□□□ -2.85
Ddb1Q3U1J4 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.85□□□□□ -2.87
Ddb1Q3U1J4 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.85□□□□□ -2.87
Ddb1Q3U1J4 Mir335-201ENSMUST00000083567 98 ntBASIC-2.86□□□□□ -2.87
Ddb1Q3U1J4 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.87□□□□□ -2.87
Ddb1Q3U1J4 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.99□□□□□ -2.89
Ddb1Q3U1J4 Gm23248-201ENSMUST00000083367 108 ntBASIC-3.04□□□□□ -2.9
Ddb1Q3U1J4 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.06□□□□□ -2.9
Ddb1Q3U1J4 Mir351-201ENSMUST00000083569 99 ntBASIC-3.1□□□□□ -2.91
Ddb1Q3U1J4 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.11□□□□□ -2.91
Ddb1Q3U1J4 Gm25039-201ENSMUST00000082933 107 ntBASIC-3.13□□□□□ -2.91
Ddb1Q3U1J4 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.58□□□□□ -2.98
Ddb1Q3U1J4 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.67□□□□□ -3
Retrieved 32 of 76,532 protein–RNA pairs in 3.3 ms