Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1.12□□□□□ -2.59
Col8a1Q00780 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.13□□□□□ -2.59
Col8a1Q00780 Gm27882-201ENSMUST00000184904 74 ntBASIC-1.13□□□□□ -2.59
Col8a1Q00780 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
Col8a1Q00780 Mir485-201ENSMUST00000093620 73 ntBASIC-1.18□□□□□ -2.6
Col8a1Q00780 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.19□□□□□ -2.6
Col8a1Q00780 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.2□□□□□ -2.6
Col8a1Q00780 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.2□□□□□ -2.6
Col8a1Q00780 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.21□□□□□ -2.6
Col8a1Q00780 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.22□□□□□ -2.6
Col8a1Q00780 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.22□□□□□ -2.6
Col8a1Q00780 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.24□□□□□ -2.61
Col8a1Q00780 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.27□□□□□ -2.61
Col8a1Q00780 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.27□□□□□ -2.61
Col8a1Q00780 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.28□□□□□ -2.61
Col8a1Q00780 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.28□□□□□ -2.61
Col8a1Q00780 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.28□□□□□ -2.61
Col8a1Q00780 Mir335-201ENSMUST00000083567 98 ntBASIC-1.28□□□□□ -2.61
Col8a1Q00780 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.32□□□□□ -2.62
Col8a1Q00780 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.32□□□□□ -2.62
Col8a1Q00780 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.34□□□□□ -2.62
Col8a1Q00780 Mir154-201ENSMUST00000083514 66 ntBASIC-1.37□□□□□ -2.63
Col8a1Q00780 Mir351-201ENSMUST00000083569 99 ntBASIC-1.4□□□□□ -2.63
Col8a1Q00780 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.42□□□□□ -2.64
Col8a1Q00780 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.49□□□□□ -2.65
Col8a1Q00780 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.54□□□□□ -2.66
Col8a1Q00780 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.54□□□□□ -2.66
Col8a1Q00780 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.54□□□□□ -2.66
Col8a1Q00780 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.62□□□□□ -2.67
Col8a1Q00780 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.64□□□□□ -2.67
Col8a1Q00780 Gm25039-201ENSMUST00000082933 107 ntBASIC-1.75□□□□□ -2.69
Col8a1Q00780 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1.95□□□□□ -2.72
Retrieved 32 of 76,532 protein–RNA pairs in 185 ms