Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.01□□□□□ -2.73
Shmt1P50431 Mir485-201ENSMUST00000093620 73 ntBASIC-2.02□□□□□ -2.73
Shmt1P50431 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.03□□□□□ -2.73
Shmt1P50431 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.03□□□□□ -2.73
Shmt1P50431 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.05□□□□□ -2.74
Shmt1P50431 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.07□□□□□ -2.74
Shmt1P50431 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.07□□□□□ -2.74
Shmt1P50431 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.1□□□□□ -2.75
Shmt1P50431 Gm25254-201ENSMUST00000157239 104 ntBASIC-2.16□□□□□ -2.76
Shmt1P50431 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.18□□□□□ -2.76
Shmt1P50431 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.19□□□□□ -2.76
Shmt1P50431 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.21□□□□□ -2.76
Shmt1P50431 Gm23125-201ENSMUST00000157651 106 ntBASIC-2.24□□□□□ -2.77
Shmt1P50431 Mir335-201ENSMUST00000083567 98 ntBASIC-2.26□□□□□ -2.77
Shmt1P50431 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.27□□□□□ -2.77
Shmt1P50431 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.31□□□□□ -2.78
Shmt1P50431 Gm27671-201ENSMUST00000183739 66 ntBASIC-2.32□□□□□ -2.78
Shmt1P50431 Mir154-201ENSMUST00000083514 66 ntBASIC-2.33□□□□□ -2.78
Shmt1P50431 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.42□□□□□ -2.8
Shmt1P50431 Mir351-201ENSMUST00000083569 99 ntBASIC-2.43□□□□□ -2.8
Shmt1P50431 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.44□□□□□ -2.8
Shmt1P50431 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.62□□□□□ -2.83
Shmt1P50431 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.7□□□□□ -2.84
Shmt1P50431 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.78□□□□□ -2.85
Shmt1P50431 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.78□□□□□ -2.85
Shmt1P50431 Gm23248-201ENSMUST00000083367 108 ntBASIC-2.88□□□□□ -2.87
Shmt1P50431 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.92□□□□□ -2.88
Shmt1P50431 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.99□□□□□ -2.89
Shmt1P50431 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.55□□□□□ -2.98
Retrieved 32 of 76,532 protein–RNA pairs in 202 ms