Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23066-201ENSMUST00000158237 71 ntBASIC-0.93□□□□□ -2.56
Col3a1P08121 Mir335-201ENSMUST00000083567 98 ntBASIC-0.94□□□□□ -2.56
Col3a1P08121 Mir7670-201ENSMUST00000183689 69 ntBASIC-0.96□□□□□ -2.56
Col3a1P08121 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-0.97□□□□□ -2.56
Col3a1P08121 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-0.97□□□□□ -2.56
Col3a1P08121 Mir466o-201ENSMUST00000104832 84 ntBASIC-0.98□□□□□ -2.57
Col3a1P08121 Gm23637-201ENSMUST00000175075 94 ntBASIC-0.98□□□□□ -2.57
Col3a1P08121 Mir470-201ENSMUST00000093565 75 ntBASIC-0.99□□□□□ -2.57
Col3a1P08121 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Col3a1P08121 Gm27671-201ENSMUST00000183739 66 ntBASIC-1□□□□□ -2.57
Col3a1P08121 Mir351-201ENSMUST00000083569 99 ntBASIC-1.01□□□□□ -2.57
Col3a1P08121 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.04□□□□□ -2.58
Col3a1P08121 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.06□□□□□ -2.58
Col3a1P08121 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.07□□□□□ -2.58
Col3a1P08121 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.1□□□□□ -2.59
Col3a1P08121 Mir154-201ENSMUST00000083514 66 ntBASIC-1.11□□□□□ -2.59
Col3a1P08121 Mir485-201ENSMUST00000093620 73 ntBASIC-1.12□□□□□ -2.59
Col3a1P08121 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.14□□□□□ -2.59
Col3a1P08121 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.19□□□□□ -2.6
Col3a1P08121 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.2□□□□□ -2.6
Col3a1P08121 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.21□□□□□ -2.6
Col3a1P08121 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.23□□□□□ -2.61
Col3a1P08121 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.23□□□□□ -2.61
Col3a1P08121 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.25□□□□□ -2.61
Col3a1P08121 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.26□□□□□ -2.61
Col3a1P08121 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.35□□□□□ -2.63
Col3a1P08121 Gm25039-201ENSMUST00000082933 107 ntBASIC-1.36□□□□□ -2.63
Col3a1P08121 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.4□□□□□ -2.63
Col3a1P08121 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.43□□□□□ -2.64
Col3a1P08121 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.43□□□□□ -2.64
Col3a1P08121 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.75□□□□□ -2.69
Col3a1P08121 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1.82□□□□□ -2.7
Retrieved 32 of 76,532 protein–RNA pairs in 156.6 ms