Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir466l-201ENSMUST00000104866 121 ntBASIC-5.95□□□□□ -3.36
Hmgb3O54879 Gm24586-201ENSMUST00000116695 89 ntBASIC-6.02□□□□□ -3.37
Hmgb3O54879 Gm44303-201ENSMUST00000196348 83 ntBASIC-6.05□□□□□ -3.38
Hmgb3O54879 Gm24194-201ENSMUST00000116805 90 ntBASIC-6.06□□□□□ -3.38
Hmgb3O54879 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-6.08□□□□□ -3.38
Hmgb3O54879 Gm24396-201ENSMUST00000116905 93 ntBASIC-6.09□□□□□ -3.38
Hmgb3O54879 Gm25254-201ENSMUST00000157239 104 ntBASIC-6.11□□□□□ -3.39
Hmgb3O54879 Gm25428-201ENSMUST00000157608 114 ntBASIC-6.14□□□□□ -3.39
Hmgb3O54879 Gm25132-201ENSMUST00000082652 107 ntBASIC-6.2□□□□□ -3.4
Hmgb3O54879 Gm23826-201ENSMUST00000157394 119 ntBASIC-6.22□□□□□ -3.41
Hmgb3O54879 Gm25354-201ENSMUST00000179110 105 ntBASIC-6.25□□□□□ -3.41
Hmgb3O54879 Gm23653-201ENSMUST00000116751 97 ntBASIC-6.35□□□□□ -3.43
Hmgb3O54879 Gm25039-201ENSMUST00000082933 107 ntBASIC-6.35□□□□□ -3.43
Hmgb3O54879 Gm26259-201ENSMUST00000104778 97 ntBASIC-6.38□□□□□ -3.43
Hmgb3O54879 Gm22067-201ENSMUST00000122790 107 ntBASIC-6.48□□□□□ -3.45
Hmgb3O54879 Gm23237-201ENSMUST00000104639 92 ntBASIC-6.58□□□□□ -3.46
Hmgb3O54879 Gm25049-201ENSMUST00000158597 73 ntBASIC-6.77□□□□□ -3.49
Hmgb3O54879 Gm20473-201ENSMUST00000173064 112 ntBASIC-6.82□□□□□ -3.5
Hmgb3O54879 Gm44385-201ENSMUST00000198781 81 ntBASIC-6.83□□□□□ -3.5
Hmgb3O54879 Gm22033-201ENSMUST00000116947 90 ntBASIC-6.98□□□□□ -3.53
Hmgb3O54879 Gm23248-201ENSMUST00000083367 108 ntBASIC-7.19□□□□□ -3.56
Hmgb3O54879 Gm22540-201ENSMUST00000158168 117 ntBASIC-7.23□□□□□ -3.57
Hmgb3O54879 Gm25950-201ENSMUST00000175331 100 ntBASIC-7.3□□□□□ -3.58
Hmgb3O54879 Gm25045-201ENSMUST00000122670 99 ntBASIC-7.35□□□□□ -3.59
Hmgb3O54879 Gm24531-201ENSMUST00000157945 100 ntBASIC-7.79□□□□□ -3.66
Hmgb3O54879 Gm22069-201ENSMUST00000179911 107 ntBASIC-7.98□□□□□ -3.69
Hmgb3O54879 Gm22593-201ENSMUST00000104245 109 ntBASIC-8.01□□□□□ -3.69
Hmgb3O54879 Gm22943-201ENSMUST00000158564 76 ntBASIC-8.35□□□□□ -3.75
Hmgb3O54879 Gm23125-201ENSMUST00000157651 106 ntBASIC-8.99□□□□□ -3.85
Hmgb3O54879 Gm27645-201ENSMUST00000183348 77 ntBASIC-9.18□□□□□ -3.88
Hmgb3O54879 AC160976.1-201ENSMUST00000215092 148 ntBASIC-9.22□□□□□ -3.89
Hmgb3O54879 Gm25886-201ENSMUST00000157780 114 ntBASIC-9.57□□□□□ -3.94
Retrieved 32 of 76,532 protein–RNA pairs in 6 ms