Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
H2afb3S4R1G7 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
H2afb3S4R1G7 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.23□□□□□ -2.61
H2afb3S4R1G7 Gm22550-201ENSMUST00000179774 107 ntBASIC-1.24□□□□□ -2.61
H2afb3S4R1G7 Gm22060-201ENSMUST00000082558 107 ntBASIC-1.24□□□□□ -2.61
H2afb3S4R1G7 Gm26306-201ENSMUST00000157773 119 ntBASIC-1.25□□□□□ -2.61
H2afb3S4R1G7 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.26□□□□□ -2.61
H2afb3S4R1G7 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.27□□□□□ -2.61
H2afb3S4R1G7 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.27□□□□□ -2.61
H2afb3S4R1G7 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.28□□□□□ -2.61
H2afb3S4R1G7 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.29□□□□□ -2.62
H2afb3S4R1G7 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.3□□□□□ -2.62
H2afb3S4R1G7 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.32□□□□□ -2.62
H2afb3S4R1G7 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.32□□□□□ -2.62
H2afb3S4R1G7 Snord58b-201ENSMUST00000082937 66 ntBASIC-1.32□□□□□ -2.62
H2afb3S4R1G7 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.33□□□□□ -2.62
H2afb3S4R1G7 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.33□□□□□ -2.62
H2afb3S4R1G7 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.34□□□□□ -2.62
H2afb3S4R1G7 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.34□□□□□ -2.62
H2afb3S4R1G7 AC160976.1-201ENSMUST00000215092 148 ntBASIC-1.34□□□□□ -2.62
H2afb3S4R1G7 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.35□□□□□ -2.63
H2afb3S4R1G7 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.35□□□□□ -2.63
H2afb3S4R1G7 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.36□□□□□ -2.63
H2afb3S4R1G7 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.37□□□□□ -2.63
H2afb3S4R1G7 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.37□□□□□ -2.63
H2afb3S4R1G7 Gm25132-201ENSMUST00000082652 107 ntBASIC-1.38□□□□□ -2.63
H2afb3S4R1G7 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.39□□□□□ -2.63
H2afb3S4R1G7 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.4□□□□□ -2.63
H2afb3S4R1G7 Gm24531-201ENSMUST00000157945 100 ntBASIC-1.42□□□□□ -2.64
H2afb3S4R1G7 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.42□□□□□ -2.64
H2afb3S4R1G7 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
H2afb3S4R1G7 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.45□□□□□ -2.64
H2afb3S4R1G7 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.46□□□□□ -2.64
H2afb3S4R1G7 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.46□□□□□ -2.64
H2afb3S4R1G7 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.46□□□□□ -2.64
H2afb3S4R1G7 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.48□□□□□ -2.65
H2afb3S4R1G7 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.48□□□□□ -2.65
H2afb3S4R1G7 Mir379-201ENSMUST00000083564 66 ntBASIC-1.48□□□□□ -2.65
H2afb3S4R1G7 Gm24194-201ENSMUST00000116805 90 ntBASIC-1.53□□□□□ -2.65
H2afb3S4R1G7 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.53□□□□□ -2.65
H2afb3S4R1G7 Mir574-201ENSMUST00000103854 78 ntBASIC-1.54□□□□□ -2.66
H2afb3S4R1G7 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.54□□□□□ -2.66
H2afb3S4R1G7 Mir122-201ENSMUST00000083468 66 ntBASIC-1.55□□□□□ -2.66
H2afb3S4R1G7 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.57□□□□□ -2.66
H2afb3S4R1G7 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.58□□□□□ -2.66
H2afb3S4R1G7 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.6□□□□□ -2.67
H2afb3S4R1G7 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.61□□□□□ -2.67
H2afb3S4R1G7 Gm24387-201ENSMUST00000104625 90 ntBASIC-1.62□□□□□ -2.67
H2afb3S4R1G7 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-1.62□□□□□ -2.67
H2afb3S4R1G7 Snord8-201ENSMUST00000175303 110 ntBASIC-1.64□□□□□ -2.67
H2afb3S4R1G7 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.64□□□□□ -2.67
H2afb3S4R1G7 Mir664-201ENSMUST00000196796 69 ntBASIC-1.66□□□□□ -2.68
H2afb3S4R1G7 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.67□□□□□ -2.68
H2afb3S4R1G7 Gm44303-201ENSMUST00000196348 83 ntBASIC-1.69□□□□□ -2.68
H2afb3S4R1G7 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.72□□□□□ -2.68
H2afb3S4R1G7 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.73□□□□□ -2.69
H2afb3S4R1G7 Gm20473-201ENSMUST00000173064 112 ntBASIC-1.75□□□□□ -2.69
H2afb3S4R1G7 Mir7681-201ENSMUST00000184834 72 ntBASIC-1.75□□□□□ -2.69
H2afb3S4R1G7 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.77□□□□□ -2.69
H2afb3S4R1G7 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.78□□□□□ -2.69
H2afb3S4R1G7 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.78□□□□□ -2.69
H2afb3S4R1G7 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
H2afb3S4R1G7 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.8□□□□□ -2.7
H2afb3S4R1G7 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.82□□□□□ -2.7
H2afb3S4R1G7 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.83□□□□□ -2.7
H2afb3S4R1G7 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.85□□□□□ -2.71
H2afb3S4R1G7 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.85□□□□□ -2.71
H2afb3S4R1G7 Mir493-201ENSMUST00000103837 83 ntBASIC-1.89□□□□□ -2.71
H2afb3S4R1G7 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-1.9□□□□□ -2.71
H2afb3S4R1G7 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.93□□□□□ -2.72
H2afb3S4R1G7 Gm25886-201ENSMUST00000157780 114 ntBASIC-1.93□□□□□ -2.72
H2afb3S4R1G7 Gm22593-201ENSMUST00000104245 109 ntBASIC-1.95□□□□□ -2.72
H2afb3S4R1G7 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.96□□□□□ -2.72
H2afb3S4R1G7 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.97□□□□□ -2.72
H2afb3S4R1G7 Mir470-201ENSMUST00000093565 75 ntBASIC-1.97□□□□□ -2.72
H2afb3S4R1G7 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.99□□□□□ -2.73
H2afb3S4R1G7 Gm25049-201ENSMUST00000158597 73 ntBASIC-2.01□□□□□ -2.73
H2afb3S4R1G7 Gm24197-201ENSMUST00000175085 109 ntBASIC-2.01□□□□□ -2.73
H2afb3S4R1G7 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.03□□□□□ -2.73
H2afb3S4R1G7 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.03□□□□□ -2.73
H2afb3S4R1G7 Gm24091-201ENSMUST00000082550 83 ntBASIC-2.03□□□□□ -2.73
H2afb3S4R1G7 Gm23711-201ENSMUST00000083856 83 ntBASIC-2.03□□□□□ -2.73
H2afb3S4R1G7 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.05□□□□□ -2.74
H2afb3S4R1G7 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.08□□□□□ -2.74
H2afb3S4R1G7 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.11□□□□□ -2.75
H2afb3S4R1G7 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.14□□□□□ -2.75
H2afb3S4R1G7 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.16□□□□□ -2.76
H2afb3S4R1G7 Mir485-201ENSMUST00000093620 73 ntBASIC-2.18□□□□□ -2.76
H2afb3S4R1G7 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.19□□□□□ -2.76
H2afb3S4R1G7 Gm26008-201ENSMUST00000158797 99 ntBASIC-2.21□□□□□ -2.76
H2afb3S4R1G7 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.23□□□□□ -2.77
H2afb3S4R1G7 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.23□□□□□ -2.77
H2afb3S4R1G7 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.23□□□□□ -2.77
H2afb3S4R1G7 Gm25521-201ENSMUST00000158393 108 ntBASIC-2.24□□□□□ -2.77
H2afb3S4R1G7 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.27□□□□□ -2.77
H2afb3S4R1G7 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.29□□□□□ -2.78
H2afb3S4R1G7 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.3□□□□□ -2.78
H2afb3S4R1G7 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.33□□□□□ -2.78
H2afb3S4R1G7 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.34□□□□□ -2.78
H2afb3S4R1G7 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.35□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms