Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.52□□□□□ -2.65
Trim54Q9ERP3 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.53□□□□□ -2.65
Trim54Q9ERP3 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.53□□□□□ -2.65
Trim54Q9ERP3 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.57□□□□□ -2.66
Trim54Q9ERP3 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.59□□□□□ -2.66
Trim54Q9ERP3 Mir295-201ENSMUST00000104694 69 ntBASIC-1.6□□□□□ -2.67
Trim54Q9ERP3 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.6□□□□□ -2.67
Trim54Q9ERP3 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.6□□□□□ -2.67
Trim54Q9ERP3 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.61□□□□□ -2.67
Trim54Q9ERP3 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.63□□□□□ -2.67
Trim54Q9ERP3 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.63□□□□□ -2.67
Trim54Q9ERP3 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.64□□□□□ -2.67
Trim54Q9ERP3 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.64□□□□□ -2.67
Trim54Q9ERP3 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.64□□□□□ -2.67
Trim54Q9ERP3 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.65□□□□□ -2.67
Trim54Q9ERP3 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.66□□□□□ -2.68
Trim54Q9ERP3 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.66□□□□□ -2.68
Trim54Q9ERP3 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.68□□□□□ -2.68
Trim54Q9ERP3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
Trim54Q9ERP3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
Trim54Q9ERP3 Mir192-201ENSMUST00000083589 89 ntBASIC-1.69□□□□□ -2.68
Trim54Q9ERP3 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.7□□□□□ -2.68
Trim54Q9ERP3 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.71□□□□□ -2.68
Trim54Q9ERP3 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.71□□□□□ -2.68
Trim54Q9ERP3 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.71□□□□□ -2.68
Trim54Q9ERP3 Gm24396-201ENSMUST00000116905 93 ntBASIC-1.72□□□□□ -2.68
Trim54Q9ERP3 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.73□□□□□ -2.69
Trim54Q9ERP3 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.73□□□□□ -2.69
Trim54Q9ERP3 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.74□□□□□ -2.69
Trim54Q9ERP3 Gm22069-201ENSMUST00000179911 107 ntBASIC-1.74□□□□□ -2.69
Trim54Q9ERP3 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.76□□□□□ -2.69
Trim54Q9ERP3 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.76□□□□□ -2.69
Trim54Q9ERP3 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.77□□□□□ -2.69
Trim54Q9ERP3 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.77□□□□□ -2.69
Trim54Q9ERP3 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.8□□□□□ -2.7
Trim54Q9ERP3 Mir539-201ENSMUST00000102109 74 ntBASIC-1.81□□□□□ -2.7
Trim54Q9ERP3 Gm22540-201ENSMUST00000158168 117 ntBASIC-1.83□□□□□ -2.7
Trim54Q9ERP3 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.84□□□□□ -2.7
Trim54Q9ERP3 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.87□□□□□ -2.71
Trim54Q9ERP3 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.87□□□□□ -2.71
Trim54Q9ERP3 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.87□□□□□ -2.71
Trim54Q9ERP3 Mir122-201ENSMUST00000083468 66 ntBASIC-1.88□□□□□ -2.71
Trim54Q9ERP3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
Trim54Q9ERP3 Gm22943-201ENSMUST00000158564 76 ntBASIC-1.92□□□□□ -2.72
Trim54Q9ERP3 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.92□□□□□ -2.72
Trim54Q9ERP3 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.94□□□□□ -2.72
Trim54Q9ERP3 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.94□□□□□ -2.72
Trim54Q9ERP3 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.94□□□□□ -2.72
Trim54Q9ERP3 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.95□□□□□ -2.72
Trim54Q9ERP3 Mir379-201ENSMUST00000083564 66 ntBASIC-1.96□□□□□ -2.72
Trim54Q9ERP3 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.98□□□□□ -2.73
Trim54Q9ERP3 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.98□□□□□ -2.73
Trim54Q9ERP3 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.98□□□□□ -2.73
Trim54Q9ERP3 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.98□□□□□ -2.73
Trim54Q9ERP3 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.98□□□□□ -2.73
Trim54Q9ERP3 Gm23315-201ENSMUST00000158003 109 ntBASIC-2□□□□□ -2.73
Trim54Q9ERP3 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.01□□□□□ -2.73
Trim54Q9ERP3 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.01□□□□□ -2.73
Trim54Q9ERP3 Mir335-201ENSMUST00000083567 98 ntBASIC-2.02□□□□□ -2.73
Trim54Q9ERP3 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.05□□□□□ -2.74
Trim54Q9ERP3 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.06□□□□□ -2.74
Trim54Q9ERP3 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.09□□□□□ -2.74
Trim54Q9ERP3 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.12□□□□□ -2.75
Trim54Q9ERP3 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.14□□□□□ -2.75
Trim54Q9ERP3 Gm22127-201ENSMUST00000083239 106 ntBASIC-2.16□□□□□ -2.76
Trim54Q9ERP3 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.17□□□□□ -2.76
Trim54Q9ERP3 Mir351-201ENSMUST00000083569 99 ntBASIC-2.2□□□□□ -2.76
Trim54Q9ERP3 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.24□□□□□ -2.77
Trim54Q9ERP3 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.27□□□□□ -2.77
Trim54Q9ERP3 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.29□□□□□ -2.78
Trim54Q9ERP3 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.29□□□□□ -2.78
Trim54Q9ERP3 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.3□□□□□ -2.78
Trim54Q9ERP3 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.32□□□□□ -2.78
Trim54Q9ERP3 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.34□□□□□ -2.78
Trim54Q9ERP3 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.34□□□□□ -2.78
Trim54Q9ERP3 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.35□□□□□ -2.79
Trim54Q9ERP3 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.36□□□□□ -2.79
Trim54Q9ERP3 Gm26259-201ENSMUST00000104778 97 ntBASIC-2.39□□□□□ -2.79
Trim54Q9ERP3 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.4□□□□□ -2.79
Trim54Q9ERP3 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.4□□□□□ -2.79
Trim54Q9ERP3 Mir470-201ENSMUST00000093565 75 ntBASIC-2.4□□□□□ -2.79
Trim54Q9ERP3 Mir664-201ENSMUST00000196796 69 ntBASIC-2.41□□□□□ -2.8
Trim54Q9ERP3 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.42□□□□□ -2.8
Trim54Q9ERP3 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.43□□□□□ -2.8
Trim54Q9ERP3 Gm22550-201ENSMUST00000179774 107 ntBASIC-2.44□□□□□ -2.8
Trim54Q9ERP3 Gm22060-201ENSMUST00000082558 107 ntBASIC-2.44□□□□□ -2.8
Trim54Q9ERP3 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.47□□□□□ -2.8
Trim54Q9ERP3 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.51□□□□□ -2.81
Trim54Q9ERP3 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.52□□□□□ -2.81
Trim54Q9ERP3 Mir493-201ENSMUST00000103837 83 ntBASIC-2.54□□□□□ -2.82
Trim54Q9ERP3 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.56□□□□□ -2.82
Trim54Q9ERP3 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.61□□□□□ -2.83
Trim54Q9ERP3 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.62□□□□□ -2.83
Trim54Q9ERP3 Mir485-201ENSMUST00000093620 73 ntBASIC-2.62□□□□□ -2.83
Trim54Q9ERP3 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.63□□□□□ -2.83
Trim54Q9ERP3 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.65□□□□□ -2.83
Trim54Q9ERP3 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.66□□□□□ -2.84
Trim54Q9ERP3 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.67□□□□□ -2.84
Trim54Q9ERP3 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.67□□□□□ -2.84
Trim54Q9ERP3 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.7□□□□□ -2.84
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms