Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.41□□□□□ -2.8
Scn4aQ9ER60 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.42□□□□□ -2.8
Scn4aQ9ER60 Gm44932-201ENSMUST00000206799 121 ntBASIC-2.44□□□□□ -2.8
Scn4aQ9ER60 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.44□□□□□ -2.8
Scn4aQ9ER60 Gm44347-201ENSMUST00000199602 108 ntBASIC-2.45□□□□□ -2.8
Scn4aQ9ER60 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.47□□□□□ -2.8
Scn4aQ9ER60 Gm44385-201ENSMUST00000198781 81 ntBASIC-2.47□□□□□ -2.8
Scn4aQ9ER60 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.47□□□□□ -2.81
Scn4aQ9ER60 CT571266.1-201ENSMUST00000222859 153 ntBASIC-2.47□□□□□ -2.81
Scn4aQ9ER60 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.48□□□□□ -2.81
Scn4aQ9ER60 Mir295-201ENSMUST00000104694 69 ntBASIC-2.49□□□□□ -2.81
Scn4aQ9ER60 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.49□□□□□ -2.81
Scn4aQ9ER60 Gm22251-201ENSMUST00000083216 107 ntBASIC-2.49□□□□□ -2.81
Scn4aQ9ER60 Mir335-201ENSMUST00000083567 98 ntBASIC-2.49□□□□□ -2.81
Scn4aQ9ER60 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.5□□□□□ -2.81
Scn4aQ9ER60 Gm25681-201ENSMUST00000083938 106 ntBASIC-2.52□□□□□ -2.81
Scn4aQ9ER60 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.54□□□□□ -2.82
Scn4aQ9ER60 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.54□□□□□ -2.82
Scn4aQ9ER60 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.55□□□□□ -2.82
Scn4aQ9ER60 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.55□□□□□ -2.82
Scn4aQ9ER60 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.56□□□□□ -2.82
Scn4aQ9ER60 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.56□□□□□ -2.82
Scn4aQ9ER60 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.56□□□□□ -2.82
Scn4aQ9ER60 Gm23652-201ENSMUST00000116752 107 ntBASIC-2.56□□□□□ -2.82
Scn4aQ9ER60 Mir1187-201ENSMUST00000116936 122 ntBASIC-2.57□□□□□ -2.82
Scn4aQ9ER60 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.57□□□□□ -2.82
Scn4aQ9ER60 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.58□□□□□ -2.82
Scn4aQ9ER60 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.6□□□□□ -2.83
Scn4aQ9ER60 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.6□□□□□ -2.83
Scn4aQ9ER60 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.61□□□□□ -2.83
Scn4aQ9ER60 Mir351-201ENSMUST00000083569 99 ntBASIC-2.61□□□□□ -2.83
Scn4aQ9ER60 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.63□□□□□ -2.83
Scn4aQ9ER60 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.63□□□□□ -2.83
Scn4aQ9ER60 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.65□□□□□ -2.83
Scn4aQ9ER60 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.65□□□□□ -2.83
Scn4aQ9ER60 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.65□□□□□ -2.83
Scn4aQ9ER60 Gm44481-201ENSMUST00000197288 84 ntBASIC-2.66□□□□□ -2.84
Scn4aQ9ER60 Gm44339-201ENSMUST00000200598 84 ntBASIC-2.66□□□□□ -2.84
Scn4aQ9ER60 Gm25382-201ENSMUST00000157811 97 ntBASIC-2.7□□□□□ -2.84
Scn4aQ9ER60 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.71□□□□□ -2.84
Scn4aQ9ER60 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.71□□□□□ -2.84
Scn4aQ9ER60 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.73□□□□□ -2.85
Scn4aQ9ER60 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.73□□□□□ -2.85
Scn4aQ9ER60 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.73□□□□□ -2.85
Scn4aQ9ER60 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.74□□□□□ -2.85
Scn4aQ9ER60 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.75□□□□□ -2.85
Scn4aQ9ER60 Gm22078-201ENSMUST00000157593 103 ntBASIC-2.76□□□□□ -2.85
Scn4aQ9ER60 Gm23293-201ENSMUST00000082552 104 ntBASIC-2.77□□□□□ -2.85
Scn4aQ9ER60 Gm25465-201ENSMUST00000157716 105 ntBASIC-2.78□□□□□ -2.85
Scn4aQ9ER60 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.79□□□□□ -2.86
Scn4aQ9ER60 Gm24226-201ENSMUST00000158826 97 ntBASIC-2.79□□□□□ -2.86
Scn4aQ9ER60 Gm22950-201ENSMUST00000082776 107 ntBASIC-2.8□□□□□ -2.86
Scn4aQ9ER60 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.82□□□□□ -2.86
Scn4aQ9ER60 Mir493-201ENSMUST00000103837 83 ntBASIC-2.83□□□□□ -2.86
Scn4aQ9ER60 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.84□□□□□ -2.86
Scn4aQ9ER60 Gm22679-201ENSMUST00000116975 100 ntBASIC-2.84□□□□□ -2.86
Scn4aQ9ER60 Mir34c-201ENSMUST00000083653 77 ntBASIC-2.84□□□□□ -2.86
Scn4aQ9ER60 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.85□□□□□ -2.87
Scn4aQ9ER60 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.85□□□□□ -2.87
Scn4aQ9ER60 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.89□□□□□ -2.87
Scn4aQ9ER60 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.9□□□□□ -2.87
Scn4aQ9ER60 Mir466l-201ENSMUST00000104866 121 ntBASIC-2.93□□□□□ -2.88
Scn4aQ9ER60 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.94□□□□□ -2.88
Scn4aQ9ER60 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.95□□□□□ -2.88
Scn4aQ9ER60 Mir154-201ENSMUST00000083514 66 ntBASIC-2.96□□□□□ -2.88
Scn4aQ9ER60 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.97□□□□□ -2.88
Scn4aQ9ER60 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.97□□□□□ -2.88
Scn4aQ9ER60 Gm22474-201ENSMUST00000179407 107 ntBASIC-3□□□□□ -2.89
Scn4aQ9ER60 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.02□□□□□ -2.89
Scn4aQ9ER60 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.06□□□□□ -2.9
Scn4aQ9ER60 Mir1955-201ENSMUST00000158014 98 ntBASIC-3.07□□□□□ -2.9
Scn4aQ9ER60 Mir664-201ENSMUST00000196796 69 ntBASIC-3.08□□□□□ -2.9
Scn4aQ9ER60 Gm22260-201ENSMUST00000178643 107 ntBASIC-3.09□□□□□ -2.9
Scn4aQ9ER60 Gm22071-201ENSMUST00000116857 83 ntBASIC-3.11□□□□□ -2.91
Scn4aQ9ER60 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.11□□□□□ -2.91
Scn4aQ9ER60 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.11□□□□□ -2.91
Scn4aQ9ER60 Gm27882-201ENSMUST00000184904 74 ntBASIC-3.12□□□□□ -2.91
Scn4aQ9ER60 Gm23826-201ENSMUST00000157394 119 ntBASIC-3.16□□□□□ -2.92
Scn4aQ9ER60 Gm24710-201ENSMUST00000175235 101 ntBASIC-3.16□□□□□ -2.92
Scn4aQ9ER60 Gm24135-201ENSMUST00000179085 101 ntBASIC-3.16□□□□□ -2.92
Scn4aQ9ER60 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-3.17□□□□□ -2.92
Scn4aQ9ER60 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.19□□□□□ -2.92
Scn4aQ9ER60 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.19□□□□□ -2.92
Scn4aQ9ER60 Gm22056-201ENSMUST00000083386 81 ntBASIC-3.19□□□□□ -2.92
Scn4aQ9ER60 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.2□□□□□ -2.92
Scn4aQ9ER60 Gm22925-201ENSMUST00000174956 102 ntBASIC-3.21□□□□□ -2.92
Scn4aQ9ER60 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-3.28□□□□□ -2.94
Scn4aQ9ER60 Gm24651-201ENSMUST00000157107 107 ntBASIC-3.3□□□□□ -2.94
Scn4aQ9ER60 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.3□□□□□ -2.94
Scn4aQ9ER60 Gm25222-201ENSMUST00000158199 126 ntBASIC-3.33□□□□□ -2.94
Scn4aQ9ER60 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.36□□□□□ -2.95
Scn4aQ9ER60 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.36□□□□□ -2.95
Scn4aQ9ER60 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.4□□□□□ -2.95
Scn4aQ9ER60 Gm22033-201ENSMUST00000116947 90 ntBASIC-3.49□□□□□ -2.97
Scn4aQ9ER60 Gm25524-201ENSMUST00000101821 107 ntBASIC-3.53□□□□□ -2.97
Scn4aQ9ER60 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.53□□□□□ -2.97
Scn4aQ9ER60 Gm26227-201ENSMUST00000082510 101 ntBASIC-3.53□□□□□ -2.97
Scn4aQ9ER60 Gm22127-201ENSMUST00000083239 106 ntBASIC-3.54□□□□□ -2.98
Scn4aQ9ER60 Gm22540-201ENSMUST00000158168 117 ntBASIC-3.55□□□□□ -2.98
Scn4aQ9ER60 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.62□□□□□ -2.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms