Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.01□□□□□ -2.73
Ddx56Q9D0R4 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.01□□□□□ -2.73
Ddx56Q9D0R4 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.02□□□□□ -2.73
Ddx56Q9D0R4 Gm25465-201ENSMUST00000157716 105 ntBASIC-2.06□□□□□ -2.74
Ddx56Q9D0R4 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.07□□□□□ -2.74
Ddx56Q9D0R4 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.07□□□□□ -2.74
Ddx56Q9D0R4 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
Ddx56Q9D0R4 Gm22078-201ENSMUST00000157593 103 ntBASIC-2.08□□□□□ -2.74
Ddx56Q9D0R4 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.08□□□□□ -2.74
Ddx56Q9D0R4 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.08□□□□□ -2.74
Ddx56Q9D0R4 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.09□□□□□ -2.74
Ddx56Q9D0R4 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.09□□□□□ -2.74
Ddx56Q9D0R4 Mir192-201ENSMUST00000083589 89 ntBASIC-2.09□□□□□ -2.74
Ddx56Q9D0R4 Gm22067-201ENSMUST00000122790 107 ntBASIC-2.1□□□□□ -2.75
Ddx56Q9D0R4 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.14□□□□□ -2.75
Ddx56Q9D0R4 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.15□□□□□ -2.75
Ddx56Q9D0R4 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.16□□□□□ -2.76
Ddx56Q9D0R4 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.18□□□□□ -2.76
Ddx56Q9D0R4 Mir122-201ENSMUST00000083468 66 ntBASIC-2.21□□□□□ -2.76
Ddx56Q9D0R4 Mir539-201ENSMUST00000102109 74 ntBASIC-2.22□□□□□ -2.76
Ddx56Q9D0R4 Gm25354-201ENSMUST00000179110 105 ntBASIC-2.23□□□□□ -2.77
Ddx56Q9D0R4 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.25□□□□□ -2.77
Ddx56Q9D0R4 Gm23826-201ENSMUST00000157394 119 ntBASIC-2.25□□□□□ -2.77
Ddx56Q9D0R4 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.26□□□□□ -2.77
Ddx56Q9D0R4 Gm23237-201ENSMUST00000104639 92 ntBASIC-2.27□□□□□ -2.77
Ddx56Q9D0R4 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.27□□□□□ -2.77
Ddx56Q9D0R4 Gm25045-201ENSMUST00000122670 99 ntBASIC-2.27□□□□□ -2.77
Ddx56Q9D0R4 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.3□□□□□ -2.78
Ddx56Q9D0R4 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.3□□□□□ -2.78
Ddx56Q9D0R4 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.31□□□□□ -2.78
Ddx56Q9D0R4 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.31□□□□□ -2.78
Ddx56Q9D0R4 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.33□□□□□ -2.78
Ddx56Q9D0R4 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.33□□□□□ -2.78
Ddx56Q9D0R4 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.35□□□□□ -2.79
Ddx56Q9D0R4 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.35□□□□□ -2.79
Ddx56Q9D0R4 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.36□□□□□ -2.79
Ddx56Q9D0R4 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.37□□□□□ -2.79
Ddx56Q9D0R4 Gm27645-201ENSMUST00000183348 77 ntBASIC-2.37□□□□□ -2.79
Ddx56Q9D0R4 Gm22401-201ENSMUST00000174927 117 ntBASIC-2.38□□□□□ -2.79
Ddx56Q9D0R4 Gm24396-201ENSMUST00000116905 93 ntBASIC-2.39□□□□□ -2.79
Ddx56Q9D0R4 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.39□□□□□ -2.79
Ddx56Q9D0R4 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.39□□□□□ -2.79
Ddx56Q9D0R4 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.42□□□□□ -2.8
Ddx56Q9D0R4 Mir379-201ENSMUST00000083564 66 ntBASIC-2.43□□□□□ -2.8
Ddx56Q9D0R4 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.44□□□□□ -2.8
Ddx56Q9D0R4 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.46□□□□□ -2.8
Ddx56Q9D0R4 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.47□□□□□ -2.8
Ddx56Q9D0R4 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.47□□□□□ -2.8
Ddx56Q9D0R4 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.49□□□□□ -2.81
Ddx56Q9D0R4 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.5□□□□□ -2.81
Ddx56Q9D0R4 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.54□□□□□ -2.82
Ddx56Q9D0R4 Gm22540-201ENSMUST00000158168 117 ntBASIC-2.54□□□□□ -2.82
Ddx56Q9D0R4 Gm22069-201ENSMUST00000179911 107 ntBASIC-2.57□□□□□ -2.82
Ddx56Q9D0R4 Gm23961-201ENSMUST00000104685 97 ntBASIC-2.58□□□□□ -2.82
Ddx56Q9D0R4 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.58□□□□□ -2.82
Ddx56Q9D0R4 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.58□□□□□ -2.82
Ddx56Q9D0R4 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.59□□□□□ -2.82
Ddx56Q9D0R4 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.59□□□□□ -2.82
Ddx56Q9D0R4 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.6□□□□□ -2.83
Ddx56Q9D0R4 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.6□□□□□ -2.83
Ddx56Q9D0R4 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.61□□□□□ -2.83
Ddx56Q9D0R4 Mir335-201ENSMUST00000083567 98 ntBASIC-2.62□□□□□ -2.83
Ddx56Q9D0R4 Gm25524-201ENSMUST00000101821 107 ntBASIC-2.63□□□□□ -2.83
Ddx56Q9D0R4 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.67□□□□□ -2.84
Ddx56Q9D0R4 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.68□□□□□ -2.84
Ddx56Q9D0R4 Gm22943-201ENSMUST00000158564 76 ntBASIC-2.71□□□□□ -2.84
Ddx56Q9D0R4 Gm25950-201ENSMUST00000175331 100 ntBASIC-2.75□□□□□ -2.85
Ddx56Q9D0R4 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.77□□□□□ -2.85
Ddx56Q9D0R4 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.78□□□□□ -2.85
Ddx56Q9D0R4 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.82□□□□□ -2.86
Ddx56Q9D0R4 Mir470-201ENSMUST00000093565 75 ntBASIC-2.82□□□□□ -2.86
Ddx56Q9D0R4 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.83□□□□□ -2.86
Ddx56Q9D0R4 Gm22127-201ENSMUST00000083239 106 ntBASIC-2.84□□□□□ -2.86
Ddx56Q9D0R4 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.86□□□□□ -2.87
Ddx56Q9D0R4 Mir351-201ENSMUST00000083569 99 ntBASIC-2.86□□□□□ -2.87
Ddx56Q9D0R4 Mir485-201ENSMUST00000093620 73 ntBASIC-2.87□□□□□ -2.87
Ddx56Q9D0R4 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.91□□□□□ -2.88
Ddx56Q9D0R4 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.92□□□□□ -2.88
Ddx56Q9D0R4 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.93□□□□□ -2.88
Ddx56Q9D0R4 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.94□□□□□ -2.88
Ddx56Q9D0R4 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.97□□□□□ -2.88
Ddx56Q9D0R4 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.97□□□□□ -2.88
Ddx56Q9D0R4 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.98□□□□□ -2.89
Ddx56Q9D0R4 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.98□□□□□ -2.89
Ddx56Q9D0R4 Gm22402-201ENSMUST00000174920 110 ntBASIC-3.01□□□□□ -2.89
Ddx56Q9D0R4 Mir664-201ENSMUST00000196796 69 ntBASIC-3.02□□□□□ -2.89
Ddx56Q9D0R4 Mir7670-201ENSMUST00000183689 69 ntBASIC-3.03□□□□□ -2.89
Ddx56Q9D0R4 Gm24631-201ENSMUST00000122765 81 ntBASIC-3.07□□□□□ -2.9
Ddx56Q9D0R4 Gm26259-201ENSMUST00000104778 97 ntBASIC-3.08□□□□□ -2.9
Ddx56Q9D0R4 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.08□□□□□ -2.9
Ddx56Q9D0R4 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.08□□□□□ -2.9
Ddx56Q9D0R4 Gm23066-201ENSMUST00000158237 71 ntBASIC-3.1□□□□□ -2.91
Ddx56Q9D0R4 Mir493-201ENSMUST00000103837 83 ntBASIC-3.15□□□□□ -2.91
Ddx56Q9D0R4 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.15□□□□□ -2.91
Ddx56Q9D0R4 Gm27995-201ENSMUST00000184402 100 ntBASIC-3.17□□□□□ -2.92
Ddx56Q9D0R4 Gm26231-201ENSMUST00000175218 67 ntBASIC-3.21□□□□□ -2.92
Ddx56Q9D0R4 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.24□□□□□ -2.93
Ddx56Q9D0R4 Mir6395-201ENSMUST00000183885 91 ntBASIC-3.27□□□□□ -2.93
Ddx56Q9D0R4 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.28□□□□□ -2.93
Ddx56Q9D0R4 Gm25132-201ENSMUST00000082652 107 ntBASIC-3.33□□□□□ -2.94
Retrieved 100 of 76,532 protein–RNA pairs in 201.5 ms