Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm23653-201ENSMUST00000116751 97 ntBASIC-3.65□□□□□ -2.99
Ccdc43Q9CR29 Mir467e-201ENSMUST00000103760 87 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm24586-201ENSMUST00000116695 89 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm24226-201ENSMUST00000158826 97 ntBASIC-3.67□□□□□ -3
Ccdc43Q9CR29 Gm23787-201ENSMUST00000122538 73 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm26139-201ENSMUST00000180098 107 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm22573-201ENSMUST00000082982 102 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm25681-201ENSMUST00000083938 106 ntBASIC-3.68□□□□□ -3
Ccdc43Q9CR29 Gm25905-201ENSMUST00000158490 101 ntBASIC-3.69□□□□□ -3
Ccdc43Q9CR29 Gm22879-201ENSMUST00000082895 74 ntBASIC-3.69□□□□□ -3
Ccdc43Q9CR29 Gm23707-201ENSMUST00000104366 125 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm22232-201ENSMUST00000104654 94 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm23566-201ENSMUST00000174907 108 ntBASIC-3.7□□□□□ -3
Ccdc43Q9CR29 Gm24185-201ENSMUST00000122578 105 ntBASIC-3.71□□□□□ -3
Ccdc43Q9CR29 Gm24502-201ENSMUST00000158453 105 ntBASIC-3.71□□□□□ -3
Ccdc43Q9CR29 Gm25022-201ENSMUST00000102205 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-3.72□□□□□ -3
Ccdc43Q9CR29 Gm23293-201ENSMUST00000082552 104 ntBASIC-3.73□□□□□ -3.01
Ccdc43Q9CR29 Gm24410-201ENSMUST00000083433 107 ntBASIC-3.74□□□□□ -3.01
Ccdc43Q9CR29 Gm23785-201ENSMUST00000116741 96 ntBASIC-3.76□□□□□ -3.01
Ccdc43Q9CR29 Gm26052-201ENSMUST00000104646 84 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Gm25382-201ENSMUST00000157811 97 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Mir485-201ENSMUST00000093620 73 ntBASIC-3.77□□□□□ -3.01
Ccdc43Q9CR29 Gm44932-201ENSMUST00000206799 121 ntBASIC-3.78□□□□□ -3.01
Ccdc43Q9CR29 Gm23315-201ENSMUST00000158003 109 ntBASIC-3.79□□□□□ -3.02
Ccdc43Q9CR29 Gm22039-201ENSMUST00000157278 132 ntBASIC-3.82□□□□□ -3.02
Ccdc43Q9CR29 Gm25465-201ENSMUST00000157716 105 ntBASIC-3.87□□□□□ -3.03
Ccdc43Q9CR29 Gm23543-201ENSMUST00000158207 106 ntBASIC-3.88□□□□□ -3.03
Ccdc43Q9CR29 Gm22402-201ENSMUST00000174920 110 ntBASIC-3.88□□□□□ -3.03
Ccdc43Q9CR29 Mir7670-201ENSMUST00000183689 69 ntBASIC-3.89□□□□□ -3.03
Ccdc43Q9CR29 Gm23556-201ENSMUST00000157821 92 ntBASIC-3.9□□□□□ -3.03
Ccdc43Q9CR29 Gm22679-201ENSMUST00000116975 100 ntBASIC-3.91□□□□□ -3.04
Ccdc43Q9CR29 Gm44481-201ENSMUST00000197288 84 ntBASIC-3.95□□□□□ -3.04
Ccdc43Q9CR29 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.96□□□□□ -3.04
Ccdc43Q9CR29 Mir1955-201ENSMUST00000158014 98 ntBASIC-3.98□□□□□ -3.05
Ccdc43Q9CR29 Gm24016-201ENSMUST00000157726 68 ntBASIC-4□□□□□ -3.05
Ccdc43Q9CR29 Gm44385-201ENSMUST00000198781 81 ntBASIC-4.03□□□□□ -3.05
Ccdc43Q9CR29 Mir335-201ENSMUST00000083567 98 ntBASIC-4.04□□□□□ -3.06
Ccdc43Q9CR29 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-4.05□□□□□ -3.06
Ccdc43Q9CR29 Gm23428-201ENSMUST00000122488 102 ntBASIC-4.07□□□□□ -3.06
Ccdc43Q9CR29 Gm23066-201ENSMUST00000158237 71 ntBASIC-4.07□□□□□ -3.06
Ccdc43Q9CR29 Gm24710-201ENSMUST00000175235 101 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm24135-201ENSMUST00000179085 101 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm22056-201ENSMUST00000083386 81 ntBASIC-4.08□□□□□ -3.06
Ccdc43Q9CR29 Gm24631-201ENSMUST00000122765 81 ntBASIC-4.09□□□□□ -3.06
Ccdc43Q9CR29 Gm24538-201ENSMUST00000082612 107 ntBASIC-4.09□□□□□ -3.06
Ccdc43Q9CR29 Gm24651-201ENSMUST00000157107 107 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Gm26231-201ENSMUST00000175218 67 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-4.11□□□□□ -3.07
Ccdc43Q9CR29 Gm44339-201ENSMUST00000200598 84 ntBASIC-4.14□□□□□ -3.07
Ccdc43Q9CR29 Gm22296-201ENSMUST00000083310 103 ntBASIC-4.14□□□□□ -3.07
Ccdc43Q9CR29 Gm22078-201ENSMUST00000157593 103 ntBASIC-4.16□□□□□ -3.08
Ccdc43Q9CR29 Gm27995-201ENSMUST00000184402 100 ntBASIC-4.18□□□□□ -3.08
Ccdc43Q9CR29 Gm25222-201ENSMUST00000158199 126 ntBASIC-4.19□□□□□ -3.08
Ccdc43Q9CR29 Gm22260-201ENSMUST00000178643 107 ntBASIC-4.19□□□□□ -3.08
Ccdc43Q9CR29 Mir6395-201ENSMUST00000183885 91 ntBASIC-4.23□□□□□ -3.09
Ccdc43Q9CR29 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-4.25□□□□□ -3.09
Ccdc43Q9CR29 Mir466l-201ENSMUST00000104866 121 ntBASIC-4.29□□□□□ -3.1
Ccdc43Q9CR29 Mir34c-201ENSMUST00000083653 77 ntBASIC-4.3□□□□□ -3.1
Ccdc43Q9CR29 Gm26307-201ENSMUST00000157767 126 ntBASIC-4.31□□□□□ -3.1
Ccdc43Q9CR29 Gm22474-201ENSMUST00000179407 107 ntBASIC-4.32□□□□□ -3.1
Ccdc43Q9CR29 Mir493-201ENSMUST00000103837 83 ntBASIC-4.36□□□□□ -3.11
Ccdc43Q9CR29 Gm22401-201ENSMUST00000174927 117 ntBASIC-4.37□□□□□ -3.11
Ccdc43Q9CR29 Gm25297-201ENSMUST00000175490 67 ntBASIC-4.37□□□□□ -3.11
Ccdc43Q9CR29 Mir351-201ENSMUST00000083569 99 ntBASIC-4.4□□□□□ -3.11
Ccdc43Q9CR29 Gm22925-201ENSMUST00000174956 102 ntBASIC-4.44□□□□□ -3.12
Ccdc43Q9CR29 Mir2136-201ENSMUST00000158781 75 ntBASIC-4.47□□□□□ -3.13
Ccdc43Q9CR29 Mir664-201ENSMUST00000196796 69 ntBASIC-4.47□□□□□ -3.13
Ccdc43Q9CR29 Gm25705-201ENSMUST00000083119 104 ntBASIC-4.5□□□□□ -3.13
Ccdc43Q9CR29 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.57□□□□□ -3.14
Ccdc43Q9CR29 Mir154-201ENSMUST00000083514 66 ntBASIC-4.57□□□□□ -3.14
Ccdc43Q9CR29 Gm23961-201ENSMUST00000104685 97 ntBASIC-4.66□□□□□ -3.16
Ccdc43Q9CR29 Snord58b-201ENSMUST00000082937 66 ntBASIC-4.66□□□□□ -3.16
Ccdc43Q9CR29 Mir1912-201ENSMUST00000175298 87 ntBASIC-4.68□□□□□ -3.16
Ccdc43Q9CR29 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.7□□□□□ -3.16
Ccdc43Q9CR29 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.7□□□□□ -3.16
Ccdc43Q9CR29 Gm23676-201ENSMUST00000157314 105 ntBASIC-4.71□□□□□ -3.16
Ccdc43Q9CR29 Gm24396-201ENSMUST00000116905 93 ntBASIC-4.73□□□□□ -3.17
Ccdc43Q9CR29 Gm23826-201ENSMUST00000157394 119 ntBASIC-4.73□□□□□ -3.17
Ccdc43Q9CR29 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.75□□□□□ -3.17
Ccdc43Q9CR29 Gm25354-201ENSMUST00000179110 105 ntBASIC-4.77□□□□□ -3.17
Ccdc43Q9CR29 Gm26227-201ENSMUST00000082510 101 ntBASIC-4.77□□□□□ -3.17
Ccdc43Q9CR29 Gm25524-201ENSMUST00000101821 107 ntBASIC-4.78□□□□□ -3.17
Ccdc43Q9CR29 n-R5s155-201ENSMUST00000122531 113 ntBASIC-4.79□□□□□ -3.18
Ccdc43Q9CR29 Gm22071-201ENSMUST00000116857 83 ntBASIC-4.81□□□□□ -3.18
Ccdc43Q9CR29 Gm22127-201ENSMUST00000083239 106 ntBASIC-4.83□□□□□ -3.18
Ccdc43Q9CR29 Gm22067-201ENSMUST00000122790 107 ntBASIC-4.86□□□□□ -3.19
Ccdc43Q9CR29 Gm25867-201ENSMUST00000158254 103 ntBASIC-4.86□□□□□ -3.19
Ccdc43Q9CR29 Gm22301-201ENSMUST00000082656 107 ntBASIC-4.91□□□□□ -3.2
Ccdc43Q9CR29 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-4.96□□□□□ -3.2
Ccdc43Q9CR29 Gm23237-201ENSMUST00000104639 92 ntBASIC-4.96□□□□□ -3.2
Ccdc43Q9CR29 Gm26008-201ENSMUST00000158797 99 ntBASIC-4.99□□□□□ -3.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms