Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.46□□□□□ -2.64
H1fooQ8VIK3 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.48□□□□□ -2.65
H1fooQ8VIK3 Mir295-201ENSMUST00000104694 69 ntBASIC-1.48□□□□□ -2.65
H1fooQ8VIK3 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.48□□□□□ -2.65
H1fooQ8VIK3 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.48□□□□□ -2.65
H1fooQ8VIK3 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.49□□□□□ -2.65
H1fooQ8VIK3 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.5□□□□□ -2.65
H1fooQ8VIK3 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.52□□□□□ -2.65
H1fooQ8VIK3 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.53□□□□□ -2.65
H1fooQ8VIK3 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.54□□□□□ -2.66
H1fooQ8VIK3 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.55□□□□□ -2.66
H1fooQ8VIK3 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.55□□□□□ -2.66
H1fooQ8VIK3 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.55□□□□□ -2.66
H1fooQ8VIK3 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.55□□□□□ -2.66
H1fooQ8VIK3 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.55□□□□□ -2.66
H1fooQ8VIK3 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.56□□□□□ -2.66
H1fooQ8VIK3 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.57□□□□□ -2.66
H1fooQ8VIK3 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.57□□□□□ -2.66
H1fooQ8VIK3 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.58□□□□□ -2.66
H1fooQ8VIK3 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.61□□□□□ -2.67
H1fooQ8VIK3 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.61□□□□□ -2.67
H1fooQ8VIK3 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.61□□□□□ -2.67
H1fooQ8VIK3 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
H1fooQ8VIK3 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.63□□□□□ -2.67
H1fooQ8VIK3 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.68□□□□□ -2.68
H1fooQ8VIK3 Mir192-201ENSMUST00000083589 89 ntBASIC-1.71□□□□□ -2.68
H1fooQ8VIK3 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.73□□□□□ -2.69
H1fooQ8VIK3 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.73□□□□□ -2.69
H1fooQ8VIK3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
H1fooQ8VIK3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
H1fooQ8VIK3 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.74□□□□□ -2.69
H1fooQ8VIK3 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.75□□□□□ -2.69
H1fooQ8VIK3 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.76□□□□□ -2.69
H1fooQ8VIK3 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.77□□□□□ -2.69
H1fooQ8VIK3 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.77□□□□□ -2.69
H1fooQ8VIK3 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.8□□□□□ -2.7
H1fooQ8VIK3 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.81□□□□□ -2.7
H1fooQ8VIK3 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.81□□□□□ -2.7
H1fooQ8VIK3 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.82□□□□□ -2.7
H1fooQ8VIK3 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.82□□□□□ -2.7
H1fooQ8VIK3 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.83□□□□□ -2.7
H1fooQ8VIK3 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.83□□□□□ -2.7
H1fooQ8VIK3 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.83□□□□□ -2.7
H1fooQ8VIK3 Mir539-201ENSMUST00000102109 74 ntBASIC-1.85□□□□□ -2.71
H1fooQ8VIK3 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.87□□□□□ -2.71
H1fooQ8VIK3 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.88□□□□□ -2.71
H1fooQ8VIK3 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.92□□□□□ -2.72
H1fooQ8VIK3 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.94□□□□□ -2.72
H1fooQ8VIK3 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.95□□□□□ -2.72
H1fooQ8VIK3 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.96□□□□□ -2.72
H1fooQ8VIK3 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.97□□□□□ -2.72
H1fooQ8VIK3 Mir451b-201ENSMUST00000196157 72 ntBASIC-2□□□□□ -2.73
H1fooQ8VIK3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
H1fooQ8VIK3 Mir122-201ENSMUST00000083468 66 ntBASIC-2.05□□□□□ -2.74
H1fooQ8VIK3 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.07□□□□□ -2.74
H1fooQ8VIK3 Mir379-201ENSMUST00000083564 66 ntBASIC-2.08□□□□□ -2.74
H1fooQ8VIK3 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.09□□□□□ -2.74
H1fooQ8VIK3 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.11□□□□□ -2.75
H1fooQ8VIK3 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.14□□□□□ -2.75
H1fooQ8VIK3 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.14□□□□□ -2.75
H1fooQ8VIK3 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.16□□□□□ -2.76
H1fooQ8VIK3 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.17□□□□□ -2.76
H1fooQ8VIK3 Gm26259-201ENSMUST00000104778 97 ntBASIC-2.18□□□□□ -2.76
H1fooQ8VIK3 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.18□□□□□ -2.76
H1fooQ8VIK3 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.21□□□□□ -2.76
H1fooQ8VIK3 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.23□□□□□ -2.77
H1fooQ8VIK3 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.26□□□□□ -2.77
H1fooQ8VIK3 Mir335-201ENSMUST00000083567 98 ntBASIC-2.27□□□□□ -2.77
H1fooQ8VIK3 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.29□□□□□ -2.78
H1fooQ8VIK3 Gm22550-201ENSMUST00000179774 107 ntBASIC-2.3□□□□□ -2.78
H1fooQ8VIK3 Gm22060-201ENSMUST00000082558 107 ntBASIC-2.3□□□□□ -2.78
H1fooQ8VIK3 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.31□□□□□ -2.78
H1fooQ8VIK3 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.33□□□□□ -2.78
H1fooQ8VIK3 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.4□□□□□ -2.79
H1fooQ8VIK3 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.43□□□□□ -2.8
H1fooQ8VIK3 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.45□□□□□ -2.8
H1fooQ8VIK3 Mir664-201ENSMUST00000196796 69 ntBASIC-2.46□□□□□ -2.8
H1fooQ8VIK3 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.48□□□□□ -2.81
H1fooQ8VIK3 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.48□□□□□ -2.81
H1fooQ8VIK3 Mir351-201ENSMUST00000083569 99 ntBASIC-2.48□□□□□ -2.81
H1fooQ8VIK3 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.49□□□□□ -2.81
H1fooQ8VIK3 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.51□□□□□ -2.81
H1fooQ8VIK3 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.51□□□□□ -2.81
H1fooQ8VIK3 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.52□□□□□ -2.81
H1fooQ8VIK3 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.52□□□□□ -2.81
H1fooQ8VIK3 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.54□□□□□ -2.82
H1fooQ8VIK3 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.56□□□□□ -2.82
H1fooQ8VIK3 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.57□□□□□ -2.82
H1fooQ8VIK3 Mir470-201ENSMUST00000093565 75 ntBASIC-2.62□□□□□ -2.83
H1fooQ8VIK3 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.63□□□□□ -2.83
H1fooQ8VIK3 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.64□□□□□ -2.83
H1fooQ8VIK3 Mir493-201ENSMUST00000103837 83 ntBASIC-2.67□□□□□ -2.84
H1fooQ8VIK3 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.67□□□□□ -2.84
H1fooQ8VIK3 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.67□□□□□ -2.84
H1fooQ8VIK3 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.67□□□□□ -2.84
H1fooQ8VIK3 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.7□□□□□ -2.84
H1fooQ8VIK3 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.72□□□□□ -2.84
H1fooQ8VIK3 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.75□□□□□ -2.85
H1fooQ8VIK3 Gm44303-201ENSMUST00000196348 83 ntBASIC-2.76□□□□□ -2.85
H1fooQ8VIK3 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.78□□□□□ -2.85
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms