Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.45□□□□□ -2.64
Brf1Q8CFK2 Mir543-201ENSMUST00000102286 76 ntBASIC-1.47□□□□□ -2.64
Brf1Q8CFK2 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.47□□□□□ -2.64
Brf1Q8CFK2 Snord123-201ENSMUST00000158692 71 ntBASIC-1.48□□□□□ -2.65
Brf1Q8CFK2 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.49□□□□□ -2.65
Brf1Q8CFK2 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.49□□□□□ -2.65
Brf1Q8CFK2 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.51□□□□□ -2.65
Brf1Q8CFK2 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.51□□□□□ -2.65
Brf1Q8CFK2 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.52□□□□□ -2.65
Brf1Q8CFK2 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.52□□□□□ -2.65
Brf1Q8CFK2 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.52□□□□□ -2.65
Brf1Q8CFK2 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.52□□□□□ -2.65
Brf1Q8CFK2 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.52□□□□□ -2.65
Brf1Q8CFK2 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.57□□□□□ -2.66
Brf1Q8CFK2 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.58□□□□□ -2.66
Brf1Q8CFK2 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.61□□□□□ -2.67
Brf1Q8CFK2 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.62□□□□□ -2.67
Brf1Q8CFK2 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.64□□□□□ -2.67
Brf1Q8CFK2 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.64□□□□□ -2.67
Brf1Q8CFK2 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.64□□□□□ -2.67
Brf1Q8CFK2 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.65□□□□□ -2.67
Brf1Q8CFK2 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.67□□□□□ -2.68
Brf1Q8CFK2 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.67□□□□□ -2.68
Brf1Q8CFK2 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
Brf1Q8CFK2 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.68□□□□□ -2.68
Brf1Q8CFK2 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.7□□□□□ -2.68
Brf1Q8CFK2 Mir192-201ENSMUST00000083589 89 ntBASIC-1.7□□□□□ -2.68
Brf1Q8CFK2 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.71□□□□□ -2.68
Brf1Q8CFK2 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.71□□□□□ -2.68
Brf1Q8CFK2 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.71□□□□□ -2.68
Brf1Q8CFK2 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
Brf1Q8CFK2 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.73□□□□□ -2.69
Brf1Q8CFK2 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.73□□□□□ -2.69
Brf1Q8CFK2 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.74□□□□□ -2.69
Brf1Q8CFK2 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.74□□□□□ -2.69
Brf1Q8CFK2 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.77□□□□□ -2.69
Brf1Q8CFK2 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.79□□□□□ -2.7
Brf1Q8CFK2 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.79□□□□□ -2.7
Brf1Q8CFK2 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.82□□□□□ -2.7
Brf1Q8CFK2 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.85□□□□□ -2.71
Brf1Q8CFK2 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.86□□□□□ -2.71
Brf1Q8CFK2 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.88□□□□□ -2.71
Brf1Q8CFK2 Mir122-201ENSMUST00000083468 66 ntBASIC-1.88□□□□□ -2.71
Brf1Q8CFK2 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.9□□□□□ -2.71
Brf1Q8CFK2 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.9□□□□□ -2.71
Brf1Q8CFK2 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.91□□□□□ -2.72
Brf1Q8CFK2 Mir539-201ENSMUST00000102109 74 ntBASIC-1.92□□□□□ -2.72
Brf1Q8CFK2 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.94□□□□□ -2.72
Brf1Q8CFK2 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.95□□□□□ -2.72
Brf1Q8CFK2 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.95□□□□□ -2.72
Brf1Q8CFK2 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.96□□□□□ -2.72
Brf1Q8CFK2 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.98□□□□□ -2.73
Brf1Q8CFK2 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.99□□□□□ -2.73
Brf1Q8CFK2 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.03□□□□□ -2.73
Brf1Q8CFK2 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.06□□□□□ -2.74
Brf1Q8CFK2 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.06□□□□□ -2.74
Brf1Q8CFK2 Mir379-201ENSMUST00000083564 66 ntBASIC-2.11□□□□□ -2.75
Brf1Q8CFK2 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.13□□□□□ -2.75
Brf1Q8CFK2 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.15□□□□□ -2.75
Brf1Q8CFK2 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.17□□□□□ -2.76
Brf1Q8CFK2 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.19□□□□□ -2.76
Brf1Q8CFK2 Gm22550-201ENSMUST00000179774 107 ntBASIC-2.19□□□□□ -2.76
Brf1Q8CFK2 Gm22060-201ENSMUST00000082558 107 ntBASIC-2.19□□□□□ -2.76
Brf1Q8CFK2 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.25□□□□□ -2.77
Brf1Q8CFK2 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.27□□□□□ -2.77
Brf1Q8CFK2 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.27□□□□□ -2.77
Brf1Q8CFK2 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.28□□□□□ -2.77
Brf1Q8CFK2 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.29□□□□□ -2.78
Brf1Q8CFK2 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.32□□□□□ -2.78
Brf1Q8CFK2 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.33□□□□□ -2.78
Brf1Q8CFK2 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.34□□□□□ -2.78
Brf1Q8CFK2 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.34□□□□□ -2.78
Brf1Q8CFK2 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.36□□□□□ -2.79
Brf1Q8CFK2 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.4□□□□□ -2.79
Brf1Q8CFK2 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.41□□□□□ -2.8
Brf1Q8CFK2 Mir470-201ENSMUST00000093565 75 ntBASIC-2.41□□□□□ -2.8
Brf1Q8CFK2 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.42□□□□□ -2.8
Brf1Q8CFK2 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.46□□□□□ -2.8
Brf1Q8CFK2 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.48□□□□□ -2.81
Brf1Q8CFK2 Mir485-201ENSMUST00000093620 73 ntBASIC-2.5□□□□□ -2.81
Brf1Q8CFK2 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.52□□□□□ -2.81
Brf1Q8CFK2 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.53□□□□□ -2.81
Brf1Q8CFK2 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.53□□□□□ -2.81
Brf1Q8CFK2 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.53□□□□□ -2.81
Brf1Q8CFK2 Mir664-201ENSMUST00000196796 69 ntBASIC-2.57□□□□□ -2.82
Brf1Q8CFK2 Mir335-201ENSMUST00000083567 98 ntBASIC-2.57□□□□□ -2.82
Brf1Q8CFK2 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.61□□□□□ -2.83
Brf1Q8CFK2 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.65□□□□□ -2.83
Brf1Q8CFK2 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.66□□□□□ -2.84
Brf1Q8CFK2 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.66□□□□□ -2.84
Brf1Q8CFK2 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.67□□□□□ -2.84
Brf1Q8CFK2 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.67□□□□□ -2.84
Brf1Q8CFK2 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.67□□□□□ -2.84
Brf1Q8CFK2 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.73□□□□□ -2.85
Brf1Q8CFK2 Gm24531-201ENSMUST00000157945 100 ntBASIC-2.75□□□□□ -2.85
Brf1Q8CFK2 AC160976.1-201ENSMUST00000215092 148 ntBASIC-2.76□□□□□ -2.85
Brf1Q8CFK2 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.77□□□□□ -2.85
Brf1Q8CFK2 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.77□□□□□ -2.85
Brf1Q8CFK2 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.77□□□□□ -2.85
Brf1Q8CFK2 Mir7681-201ENSMUST00000184834 72 ntBASIC-2.77□□□□□ -2.85
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms