Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.37□□□□□ -2.47
Usp40Q8BWR4 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.39□□□□□ -2.47
Usp40Q8BWR4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.39□□□□□ -2.47
Usp40Q8BWR4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.4□□□□□ -2.47
Usp40Q8BWR4 Mir183-201ENSMUST00000083685 70 ntBASIC-0.4□□□□□ -2.47
Usp40Q8BWR4 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.41□□□□□ -2.48
Usp40Q8BWR4 Gm23556-201ENSMUST00000157821 92 ntBASIC-0.42□□□□□ -2.48
Usp40Q8BWR4 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm22573-201ENSMUST00000082982 102 ntBASIC-0.43□□□□□ -2.48
Usp40Q8BWR4 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.44□□□□□ -2.48
Usp40Q8BWR4 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.44□□□□□ -2.48
Usp40Q8BWR4 Mir1912-201ENSMUST00000175298 87 ntBASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
Usp40Q8BWR4 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.48□□□□□ -2.49
Usp40Q8BWR4 Gm22783-201ENSMUST00000104089 107 ntBASIC-0.49□□□□□ -2.49
Usp40Q8BWR4 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.49□□□□□ -2.49
Usp40Q8BWR4 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.5□□□□□ -2.49
Usp40Q8BWR4 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.5□□□□□ -2.49
Usp40Q8BWR4 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.51□□□□□ -2.49
Usp40Q8BWR4 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.52□□□□□ -2.49
Usp40Q8BWR4 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.53□□□□□ -2.49
Usp40Q8BWR4 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.53□□□□□ -2.49
Usp40Q8BWR4 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.55□□□□□ -2.5
Usp40Q8BWR4 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.56□□□□□ -2.5
Usp40Q8BWR4 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.58□□□□□ -2.5
Usp40Q8BWR4 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.61□□□□□ -2.51
Usp40Q8BWR4 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.64□□□□□ -2.51
Usp40Q8BWR4 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.65□□□□□ -2.51
Usp40Q8BWR4 Mir543-201ENSMUST00000102286 76 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Mir574-201ENSMUST00000103854 78 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.67□□□□□ -2.52
Usp40Q8BWR4 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.68□□□□□ -2.52
Usp40Q8BWR4 Mir379-201ENSMUST00000083564 66 ntBASIC-0.68□□□□□ -2.52
Usp40Q8BWR4 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.71□□□□□ -2.52
Usp40Q8BWR4 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.72□□□□□ -2.52
Usp40Q8BWR4 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.73□□□□□ -2.53
Usp40Q8BWR4 Gm25521-201ENSMUST00000158393 108 ntBASIC-0.74□□□□□ -2.53
Usp40Q8BWR4 Gm25254-201ENSMUST00000157239 104 ntBASIC-0.75□□□□□ -2.53
Usp40Q8BWR4 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.76□□□□□ -2.53
Usp40Q8BWR4 Mir493-201ENSMUST00000103837 83 ntBASIC-0.78□□□□□ -2.53
Usp40Q8BWR4 Gm25867-201ENSMUST00000158254 103 ntBASIC-0.79□□□□□ -2.54
Usp40Q8BWR4 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.84□□□□□ -2.54
Usp40Q8BWR4 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.86□□□□□ -2.55
Usp40Q8BWR4 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.88□□□□□ -2.55
Usp40Q8BWR4 Snord8-201ENSMUST00000175303 110 ntBASIC-0.91□□□□□ -2.56
Usp40Q8BWR4 Gm24016-201ENSMUST00000157726 68 ntBASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-0.92□□□□□ -2.56
Usp40Q8BWR4 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.93□□□□□ -2.56
Usp40Q8BWR4 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.94□□□□□ -2.56
Usp40Q8BWR4 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.95□□□□□ -2.56
Usp40Q8BWR4 Mir122-201ENSMUST00000083468 66 ntBASIC-0.95□□□□□ -2.56
Usp40Q8BWR4 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Gm26008-201ENSMUST00000158797 99 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.97□□□□□ -2.56
Usp40Q8BWR4 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.99□□□□□ -2.57
Usp40Q8BWR4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Gm27882-201ENSMUST00000184904 74 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Mir6964-201ENSMUST00000200252 59 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Gm23613-201ENSMUST00000082596 87 ntBASIC-1□□□□□ -2.57
Usp40Q8BWR4 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.01□□□□□ -2.57
Usp40Q8BWR4 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.04□□□□□ -2.58
Usp40Q8BWR4 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.07□□□□□ -2.58
Usp40Q8BWR4 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.07□□□□□ -2.58
Usp40Q8BWR4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.11□□□□□ -2.59
Usp40Q8BWR4 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.13□□□□□ -2.59
Usp40Q8BWR4 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.14□□□□□ -2.59
Usp40Q8BWR4 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.15□□□□□ -2.59
Usp40Q8BWR4 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.17□□□□□ -2.6
Usp40Q8BWR4 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.17□□□□□ -2.6
Usp40Q8BWR4 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Mir470-201ENSMUST00000093565 75 ntBASIC-1.18□□□□□ -2.6
Usp40Q8BWR4 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.19□□□□□ -2.6
Usp40Q8BWR4 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.19□□□□□ -2.6
Usp40Q8BWR4 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.23□□□□□ -2.61
Usp40Q8BWR4 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.24□□□□□ -2.61
Usp40Q8BWR4 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.31□□□□□ -2.62
Usp40Q8BWR4 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.31□□□□□ -2.62
Usp40Q8BWR4 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
Usp40Q8BWR4 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.34□□□□□ -2.62
Usp40Q8BWR4 Mir485-201ENSMUST00000093620 73 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms