Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.96□□□□□ -2.72
ClpbQ60649 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.96□□□□□ -2.72
ClpbQ60649 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.96□□□□□ -2.72
ClpbQ60649 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.99□□□□□ -2.73
ClpbQ60649 Gm22067-201ENSMUST00000122790 107 ntBASIC-2□□□□□ -2.73
ClpbQ60649 Gm23811-201ENSMUST00000175155 84 ntBASIC-2□□□□□ -2.73
ClpbQ60649 Gm22879-201ENSMUST00000082895 74 ntBASIC-2□□□□□ -2.73
ClpbQ60649 Gm23826-201ENSMUST00000157394 119 ntBASIC-2.01□□□□□ -2.73
ClpbQ60649 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.01□□□□□ -2.73
ClpbQ60649 Gm25045-201ENSMUST00000122670 99 ntBASIC-2.03□□□□□ -2.73
ClpbQ60649 Gm27645-201ENSMUST00000183348 77 ntBASIC-2.04□□□□□ -2.74
ClpbQ60649 Mir192-201ENSMUST00000083589 89 ntBASIC-2.05□□□□□ -2.74
ClpbQ60649 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.06□□□□□ -2.74
ClpbQ60649 Gm23237-201ENSMUST00000104639 92 ntBASIC-2.08□□□□□ -2.74
ClpbQ60649 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.08□□□□□ -2.74
ClpbQ60649 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.08□□□□□ -2.74
ClpbQ60649 Gm25354-201ENSMUST00000179110 105 ntBASIC-2.08□□□□□ -2.74
ClpbQ60649 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.09□□□□□ -2.74
ClpbQ60649 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.14□□□□□ -2.75
ClpbQ60649 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.15□□□□□ -2.75
ClpbQ60649 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.15□□□□□ -2.75
ClpbQ60649 Gm24396-201ENSMUST00000116905 93 ntBASIC-2.17□□□□□ -2.76
ClpbQ60649 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.17□□□□□ -2.76
ClpbQ60649 Mir379-201ENSMUST00000083564 66 ntBASIC-2.19□□□□□ -2.76
ClpbQ60649 Gm22401-201ENSMUST00000174927 117 ntBASIC-2.2□□□□□ -2.76
ClpbQ60649 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.21□□□□□ -2.76
ClpbQ60649 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.22□□□□□ -2.76
ClpbQ60649 Gm22540-201ENSMUST00000158168 117 ntBASIC-2.23□□□□□ -2.77
ClpbQ60649 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.24□□□□□ -2.77
ClpbQ60649 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.26□□□□□ -2.77
ClpbQ60649 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.27□□□□□ -2.77
ClpbQ60649 Mir539-201ENSMUST00000102109 74 ntBASIC-2.28□□□□□ -2.77
ClpbQ60649 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.29□□□□□ -2.78
ClpbQ60649 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.3□□□□□ -2.78
ClpbQ60649 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.3□□□□□ -2.78
ClpbQ60649 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.3□□□□□ -2.78
ClpbQ60649 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.3□□□□□ -2.78
ClpbQ60649 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.3□□□□□ -2.78
ClpbQ60649 Gm22069-201ENSMUST00000179911 107 ntBASIC-2.31□□□□□ -2.78
ClpbQ60649 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.33□□□□□ -2.78
ClpbQ60649 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.37□□□□□ -2.79
ClpbQ60649 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.39□□□□□ -2.79
ClpbQ60649 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.39□□□□□ -2.79
ClpbQ60649 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.39□□□□□ -2.79
ClpbQ60649 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.4□□□□□ -2.79
ClpbQ60649 Gm25524-201ENSMUST00000101821 107 ntBASIC-2.41□□□□□ -2.8
ClpbQ60649 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.41□□□□□ -2.8
ClpbQ60649 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.41□□□□□ -2.8
ClpbQ60649 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.42□□□□□ -2.8
ClpbQ60649 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.42□□□□□ -2.8
ClpbQ60649 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.43□□□□□ -2.8
ClpbQ60649 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.43□□□□□ -2.8
ClpbQ60649 Gm22943-201ENSMUST00000158564 76 ntBASIC-2.44□□□□□ -2.8
ClpbQ60649 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.46□□□□□ -2.8
ClpbQ60649 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.47□□□□□ -2.8
ClpbQ60649 Mir470-201ENSMUST00000093565 75 ntBASIC-2.47□□□□□ -2.8
ClpbQ60649 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.48□□□□□ -2.81
ClpbQ60649 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.49□□□□□ -2.81
ClpbQ60649 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.52□□□□□ -2.81
ClpbQ60649 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.52□□□□□ -2.81
ClpbQ60649 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.53□□□□□ -2.81
ClpbQ60649 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.54□□□□□ -2.82
ClpbQ60649 Gm23961-201ENSMUST00000104685 97 ntBASIC-2.56□□□□□ -2.82
ClpbQ60649 Gm25950-201ENSMUST00000175331 100 ntBASIC-2.56□□□□□ -2.82
ClpbQ60649 Mir485-201ENSMUST00000093620 73 ntBASIC-2.56□□□□□ -2.82
ClpbQ60649 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.57□□□□□ -2.82
ClpbQ60649 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.57□□□□□ -2.82
ClpbQ60649 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.57□□□□□ -2.82
ClpbQ60649 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.64□□□□□ -2.83
ClpbQ60649 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.65□□□□□ -2.83
ClpbQ60649 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.65□□□□□ -2.83
ClpbQ60649 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.66□□□□□ -2.84
ClpbQ60649 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.7□□□□□ -2.84
ClpbQ60649 Gm22127-201ENSMUST00000083239 106 ntBASIC-2.7□□□□□ -2.84
ClpbQ60649 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.74□□□□□ -2.85
ClpbQ60649 Mir335-201ENSMUST00000083567 98 ntBASIC-2.77□□□□□ -2.85
ClpbQ60649 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.78□□□□□ -2.85
ClpbQ60649 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.79□□□□□ -2.86
ClpbQ60649 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.81□□□□□ -2.86
ClpbQ60649 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.82□□□□□ -2.86
ClpbQ60649 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.82□□□□□ -2.86
ClpbQ60649 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.84□□□□□ -2.86
ClpbQ60649 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.86□□□□□ -2.87
ClpbQ60649 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.86□□□□□ -2.87
ClpbQ60649 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.89□□□□□ -2.87
ClpbQ60649 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.89□□□□□ -2.87
ClpbQ60649 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.91□□□□□ -2.88
ClpbQ60649 Gm26259-201ENSMUST00000104778 97 ntBASIC-2.95□□□□□ -2.88
ClpbQ60649 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.96□□□□□ -2.88
ClpbQ60649 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.96□□□□□ -2.88
ClpbQ60649 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.98□□□□□ -2.89
ClpbQ60649 Mir493-201ENSMUST00000103837 83 ntBASIC-2.99□□□□□ -2.89
ClpbQ60649 Gm22550-201ENSMUST00000179774 107 ntBASIC-3□□□□□ -2.89
ClpbQ60649 Gm22060-201ENSMUST00000082558 107 ntBASIC-3□□□□□ -2.89
ClpbQ60649 Mir351-201ENSMUST00000083569 99 ntBASIC-3□□□□□ -2.89
ClpbQ60649 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.03□□□□□ -2.89
ClpbQ60649 Mir664-201ENSMUST00000196796 69 ntBASIC-3.05□□□□□ -2.9
ClpbQ60649 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.05□□□□□ -2.9
ClpbQ60649 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.08□□□□□ -2.9
ClpbQ60649 Gm25132-201ENSMUST00000082652 107 ntBASIC-3.13□□□□□ -2.91
Retrieved 100 of 76,532 protein–RNA pairs in 176.1 ms