Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.01□□□□□ -2.73
Usp28Q5I043 Mir295-201ENSMUST00000104694 69 ntBASIC-2.02□□□□□ -2.73
Usp28Q5I043 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.02□□□□□ -2.73
Usp28Q5I043 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-2.03□□□□□ -2.73
Usp28Q5I043 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.04□□□□□ -2.74
Usp28Q5I043 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.04□□□□□ -2.74
Usp28Q5I043 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.04□□□□□ -2.74
Usp28Q5I043 Gm25847-201ENSMUST00000116793 96 ntBASIC-2.06□□□□□ -2.74
Usp28Q5I043 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.08□□□□□ -2.74
Usp28Q5I043 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-2.08□□□□□ -2.74
Usp28Q5I043 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.1□□□□□ -2.75
Usp28Q5I043 Mir539-201ENSMUST00000102109 74 ntBASIC-2.11□□□□□ -2.75
Usp28Q5I043 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.11□□□□□ -2.75
Usp28Q5I043 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.11□□□□□ -2.75
Usp28Q5I043 Mir379-201ENSMUST00000083564 66 ntBASIC-2.12□□□□□ -2.75
Usp28Q5I043 Mir466l-201ENSMUST00000104866 121 ntBASIC-2.13□□□□□ -2.75
Usp28Q5I043 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.17□□□□□ -2.76
Usp28Q5I043 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.2□□□□□ -2.76
Usp28Q5I043 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.22□□□□□ -2.76
Usp28Q5I043 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.24□□□□□ -2.77
Usp28Q5I043 Gm25465-201ENSMUST00000157716 105 ntBASIC-2.25□□□□□ -2.77
Usp28Q5I043 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.25□□□□□ -2.77
Usp28Q5I043 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.26□□□□□ -2.77
Usp28Q5I043 Mir34c-201ENSMUST00000083653 77 ntBASIC-2.26□□□□□ -2.77
Usp28Q5I043 Gm22078-201ENSMUST00000157593 103 ntBASIC-2.29□□□□□ -2.78
Usp28Q5I043 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.3□□□□□ -2.78
Usp28Q5I043 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.31□□□□□ -2.78
Usp28Q5I043 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.32□□□□□ -2.78
Usp28Q5I043 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.33□□□□□ -2.78
Usp28Q5I043 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.34□□□□□ -2.78
Usp28Q5I043 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.36□□□□□ -2.79
Usp28Q5I043 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.38□□□□□ -2.79
Usp28Q5I043 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.39□□□□□ -2.79
Usp28Q5I043 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.4□□□□□ -2.79
Usp28Q5I043 Mir470-201ENSMUST00000093565 75 ntBASIC-2.4□□□□□ -2.79
Usp28Q5I043 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.41□□□□□ -2.8
Usp28Q5I043 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.42□□□□□ -2.8
Usp28Q5I043 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.44□□□□□ -2.8
Usp28Q5I043 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.46□□□□□ -2.8
Usp28Q5I043 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.46□□□□□ -2.8
Usp28Q5I043 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.47□□□□□ -2.8
Usp28Q5I043 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.47□□□□□ -2.8
Usp28Q5I043 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.47□□□□□ -2.8
Usp28Q5I043 Gm22401-201ENSMUST00000174927 117 ntBASIC-2.48□□□□□ -2.81
Usp28Q5I043 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.48□□□□□ -2.81
Usp28Q5I043 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.49□□□□□ -2.81
Usp28Q5I043 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.5□□□□□ -2.81
Usp28Q5I043 Mir485-201ENSMUST00000093620 73 ntBASIC-2.51□□□□□ -2.81
Usp28Q5I043 Gm22067-201ENSMUST00000122790 107 ntBASIC-2.52□□□□□ -2.81
Usp28Q5I043 Gm22033-201ENSMUST00000116947 90 ntBASIC-2.53□□□□□ -2.81
Usp28Q5I043 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.53□□□□□ -2.81
Usp28Q5I043 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.53□□□□□ -2.81
Usp28Q5I043 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.54□□□□□ -2.82
Usp28Q5I043 Gm25354-201ENSMUST00000179110 105 ntBASIC-2.58□□□□□ -2.82
Usp28Q5I043 Gm23826-201ENSMUST00000157394 119 ntBASIC-2.59□□□□□ -2.82
Usp28Q5I043 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.59□□□□□ -2.82
Usp28Q5I043 Gm24396-201ENSMUST00000116905 93 ntBASIC-2.63□□□□□ -2.83
Usp28Q5I043 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.64□□□□□ -2.83
Usp28Q5I043 Gm23237-201ENSMUST00000104639 92 ntBASIC-2.65□□□□□ -2.83
Usp28Q5I043 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.65□□□□□ -2.83
Usp28Q5I043 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.65□□□□□ -2.83
Usp28Q5I043 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.68□□□□□ -2.84
Usp28Q5I043 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.69□□□□□ -2.84
Usp28Q5I043 Gm23961-201ENSMUST00000104685 97 ntBASIC-2.7□□□□□ -2.84
Usp28Q5I043 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.7□□□□□ -2.84
Usp28Q5I043 Mir335-201ENSMUST00000083567 98 ntBASIC-2.7□□□□□ -2.84
Usp28Q5I043 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.71□□□□□ -2.84
Usp28Q5I043 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.74□□□□□ -2.85
Usp28Q5I043 Gm25045-201ENSMUST00000122670 99 ntBASIC-2.75□□□□□ -2.85
Usp28Q5I043 Gm25524-201ENSMUST00000101821 107 ntBASIC-2.8□□□□□ -2.86
Usp28Q5I043 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.8□□□□□ -2.86
Usp28Q5I043 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.83□□□□□ -2.86
Usp28Q5I043 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.84□□□□□ -2.86
Usp28Q5I043 Mir493-201ENSMUST00000103837 83 ntBASIC-2.85□□□□□ -2.87
Usp28Q5I043 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.85□□□□□ -2.87
Usp28Q5I043 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.86□□□□□ -2.87
Usp28Q5I043 Mir664-201ENSMUST00000196796 69 ntBASIC-2.88□□□□□ -2.87
Usp28Q5I043 Gm22127-201ENSMUST00000083239 106 ntBASIC-2.89□□□□□ -2.87
Usp28Q5I043 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.9□□□□□ -2.87
Usp28Q5I043 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.9□□□□□ -2.87
Usp28Q5I043 Mir351-201ENSMUST00000083569 99 ntBASIC-2.96□□□□□ -2.88
Usp28Q5I043 Gm22540-201ENSMUST00000158168 117 ntBASIC-2.97□□□□□ -2.88
Usp28Q5I043 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.97□□□□□ -2.88
Usp28Q5I043 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.98□□□□□ -2.89
Usp28Q5I043 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.98□□□□□ -2.89
Usp28Q5I043 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.01□□□□□ -2.89
Usp28Q5I043 Mir154-201ENSMUST00000083514 66 ntBASIC-3.01□□□□□ -2.89
Usp28Q5I043 Gm25297-201ENSMUST00000175490 67 ntBASIC-3.02□□□□□ -2.89
Usp28Q5I043 Gm25705-201ENSMUST00000083119 104 ntBASIC-3.05□□□□□ -2.9
Usp28Q5I043 Gm22069-201ENSMUST00000179911 107 ntBASIC-3.07□□□□□ -2.9
Usp28Q5I043 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.08□□□□□ -2.9
Usp28Q5I043 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.08□□□□□ -2.9
Usp28Q5I043 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.09□□□□□ -2.9
Usp28Q5I043 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.09□□□□□ -2.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms