Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC108945.1-201ENSMUST00000226477 94 ntBASIC-6.8□□□□□ -3.5
Ccdc88bQ4QRL3 Gm22836-201ENSMUST00000158441 61 ntBASIC-6.81□□□□□ -3.5
Ccdc88bQ4QRL3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 Gm23961-201ENSMUST00000104685 97 ntBASIC-6.82□□□□□ -3.5
Ccdc88bQ4QRL3 AC160962.3-201ENSMUST00000225914 112 ntBASIC-6.84□□□□□ -3.5
Ccdc88bQ4QRL3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-6.86□□□□□ -3.51
Ccdc88bQ4QRL3 Gm25397-201ENSMUST00000176951 92 ntBASIC-6.87□□□□□ -3.51
Ccdc88bQ4QRL3 Gm23248-201ENSMUST00000083367 108 ntBASIC-6.94□□□□□ -3.52
Ccdc88bQ4QRL3 Gm26401-201ENSMUST00000158502 76 ntBASIC-6.98□□□□□ -3.53
Ccdc88bQ4QRL3 Gm25132-201ENSMUST00000082652 107 ntBASIC-7.03□□□□□ -3.53
Ccdc88bQ4QRL3 mt-Tr-201ENSMUST00000082412 68 ntBASIC-7.04□□□□□ -3.54
Ccdc88bQ4QRL3 Gm23293-201ENSMUST00000082552 104 ntBASIC-7.09□□□□□ -3.54
Ccdc88bQ4QRL3 Gm37845-201ENSMUST00000194977 355 ntBASIC-7.11□□□□□ -3.55
Ccdc88bQ4QRL3 Gm23977-201ENSMUST00000177871 74 ntBASIC-7.14□□□□□ -3.55
Ccdc88bQ4QRL3 Gm23864-201ENSMUST00000177607 107 ntBASIC-7.16□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25380-201ENSMUST00000175463 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm24641-201ENSMUST00000178055 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25484-201ENSMUST00000178217 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm26138-201ENSMUST00000179236 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm22821-201ENSMUST00000179288 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm23298-201ENSMUST00000083181 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25516-201ENSMUST00000083857 107 ntBASIC-7.19□□□□□ -3.56
Ccdc88bQ4QRL3 Gm22679-201ENSMUST00000116975 100 ntBASIC-7.22□□□□□ -3.56
Ccdc88bQ4QRL3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-7.22□□□□□ -3.56
Ccdc88bQ4QRL3 Gm25524-201ENSMUST00000101821 107 ntBASIC-7.23□□□□□ -3.57
Ccdc88bQ4QRL3 Gm25049-201ENSMUST00000158597 73 ntBASIC-7.24□□□□□ -3.57
Ccdc88bQ4QRL3 Gm23644-201ENSMUST00000157856 77 ntBASIC-7.24□□□□□ -3.57
Ccdc88bQ4QRL3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-7.26□□□□□ -3.57
Ccdc88bQ4QRL3 Gm26412-201ENSMUST00000157666 55 ntBASIC-7.31□□□□□ -3.58
Ccdc88bQ4QRL3 Gm28724-201ENSMUST00000186149 625 ntBASIC-7.31□□□□□ -3.58
Ccdc88bQ4QRL3 Gm25401-201ENSMUST00000082975 106 ntBASIC-7.34□□□□□ -3.58
Ccdc88bQ4QRL3 Gm25565-201ENSMUST00000104605 105 ntBASIC-7.4□□□□□ -3.59
Ccdc88bQ4QRL3 Gm22213-201ENSMUST00000157564 119 ntBASIC-7.42□□□□□ -3.6
Ccdc88bQ4QRL3 Gm25382-201ENSMUST00000157811 97 ntBASIC-7.42□□□□□ -3.6
Ccdc88bQ4QRL3 Snord50a-201ENSMUST00000178154 72 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm24463-201ENSMUST00000178417 72 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm24234-201ENSMUST00000104316 107 ntBASIC-7.43□□□□□ -3.6
Ccdc88bQ4QRL3 Gm20473-201ENSMUST00000173064 112 ntBASIC-7.44□□□□□ -3.6
Ccdc88bQ4QRL3 Gm44322-201ENSMUST00000196830 115 ntBASIC-7.5□□□□□ -3.61
Ccdc88bQ4QRL3 Mir6375-201ENSMUST00000197176 95 ntBASIC-7.51□□□□□ -3.61
Ccdc88bQ4QRL3 Gm26259-201ENSMUST00000104778 97 ntBASIC-7.52□□□□□ -3.61
Ccdc88bQ4QRL3 Gm23652-201ENSMUST00000116752 107 ntBASIC-7.53□□□□□ -3.61
Ccdc88bQ4QRL3 Gm22251-201ENSMUST00000083216 107 ntBASIC-7.54□□□□□ -3.62
Ccdc88bQ4QRL3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-7.57□□□□□ -3.62
Ccdc88bQ4QRL3 Gm20734-201ENSMUST00000216939 193 ntBASIC-7.59□□□□□ -3.62
Ccdc88bQ4QRL3 Gm24001-201ENSMUST00000158463 85 ntBASIC-7.6□□□□□ -3.63
Ccdc88bQ4QRL3 Mir450b-201ENSMUST00000102095 82 ntBASIC-7.61□□□□□ -3.63
Ccdc88bQ4QRL3 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-7.62□□□□□ -3.63
Ccdc88bQ4QRL3 Gm22845-201ENSMUST00000157712 104 ntBASIC-7.68□□□□□ -3.64
Ccdc88bQ4QRL3 Gm22621-201ENSMUST00000179678 74 ntBASIC-7.68□□□□□ -3.64
Ccdc88bQ4QRL3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-7.71□□□□□ -3.64
Ccdc88bQ4QRL3 Gm23038-201ENSMUST00000083873 104 ntBASIC-7.73□□□□□ -3.65
Ccdc88bQ4QRL3 Gm24396-201ENSMUST00000116905 93 ntBASIC-7.78□□□□□ -3.65
Ccdc88bQ4QRL3 AC161426.1-201ENSMUST00000214137 286 ntBASIC-7.78□□□□□ -3.65
Ccdc88bQ4QRL3 Gm24676-201ENSMUST00000158758 75 ntBASIC-7.86□□□□□ -3.67
Ccdc88bQ4QRL3 Gm25007-201ENSMUST00000083808 133 ntBASIC-7.89□□□□□ -3.67
Ccdc88bQ4QRL3 Gm22258-201ENSMUST00000177645 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm26032-201ENSMUST00000178535 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25210-201ENSMUST00000178813 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25157-201ENSMUST00000178914 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22046-201ENSMUST00000179027 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22941-201ENSMUST00000179630 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25471-201ENSMUST00000180126 94 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm28925-201ENSMUST00000188586 168 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Gm22950-201ENSMUST00000082776 107 ntBASIC-7.91□□□□□ -3.68
Ccdc88bQ4QRL3 Mir34c-201ENSMUST00000083653 77 ntBASIC-7.94□□□□□ -3.68
Ccdc88bQ4QRL3 Gm25022-201ENSMUST00000102205 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Gm25135-201ENSMUST00000082648 143 ntBASIC-8□□□□□ -3.69
Ccdc88bQ4QRL3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-8.06□□□□□ -3.7
Ccdc88bQ4QRL3 Gm25987-201ENSMUST00000083234 107 ntBASIC-8.06□□□□□ -3.7
Ccdc88bQ4QRL3 Gm24167-201ENSMUST00000177733 124 ntBASIC-8.07□□□□□ -3.7
Ccdc88bQ4QRL3 Gm24028-201ENSMUST00000178991 124 ntBASIC-8.07□□□□□ -3.7
Ccdc88bQ4QRL3 Gm23826-201ENSMUST00000157394 119 ntBASIC-8.09□□□□□ -3.7
Ccdc88bQ4QRL3 Gm25354-201ENSMUST00000179110 105 ntBASIC-8.18□□□□□ -3.72
Ccdc88bQ4QRL3 Mir466l-201ENSMUST00000104866 121 ntBASIC-8.19□□□□□ -3.72
Ccdc88bQ4QRL3 Gm23966-201ENSMUST00000179823 107 ntBASIC-8.2□□□□□ -3.72
Ccdc88bQ4QRL3 Gm26474-201ENSMUST00000116762 122 ntBASIC-8.23□□□□□ -3.73
Ccdc88bQ4QRL3 Gm24148-201ENSMUST00000082762 80 ntBASIC-8.3□□□□□ -3.74
Ccdc88bQ4QRL3 Gm24605-201ENSMUST00000104772 96 ntBASIC-8.36□□□□□ -3.75
Ccdc88bQ4QRL3 Gm23350-201ENSMUST00000158429 103 ntBASIC-8.37□□□□□ -3.75
Ccdc88bQ4QRL3 Gm25815-201ENSMUST00000082755 107 ntBASIC-8.4□□□□□ -3.75
Ccdc88bQ4QRL3 Gm23970-201ENSMUST00000083319 107 ntBASIC-8.43□□□□□ -3.76
Ccdc88bQ4QRL3 Gm22911-201ENSMUST00000177920 107 ntBASIC-8.5□□□□□ -3.77
Ccdc88bQ4QRL3 Gm22067-201ENSMUST00000122790 107 ntBASIC-8.59□□□□□ -3.78
Ccdc88bQ4QRL3 Gm23578-201ENSMUST00000103943 104 ntBASIC-8.6□□□□□ -3.79
Ccdc88bQ4QRL3 Gm24835-201ENSMUST00000116777 111 ntBASIC-8.65□□□□□ -3.79
Ccdc88bQ4QRL3 Gm23237-201ENSMUST00000104639 92 ntBASIC-8.7□□□□□ -3.8
Ccdc88bQ4QRL3 Gm26092-201ENSMUST00000179798 97 ntBASIC-8.76□□□□□ -3.81
Ccdc88bQ4QRL3 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-8.76□□□□□ -3.81
Ccdc88bQ4QRL3 Gm22593-201ENSMUST00000104245 109 ntBASIC-8.8□□□□□ -3.82
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms