Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.24□□□□□ -2.45
Uspl1Q3ULM6 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Uspl1Q3ULM6 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Uspl1Q3ULM6 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.24□□□□□ -2.45
Uspl1Q3ULM6 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.24□□□□□ -2.45
Uspl1Q3ULM6 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Uspl1Q3ULM6 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0.27□□□□□ -2.45
Uspl1Q3ULM6 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.27□□□□□ -2.45
Uspl1Q3ULM6 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.27□□□□□ -2.45
Uspl1Q3ULM6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.28□□□□□ -2.45
Uspl1Q3ULM6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.29□□□□□ -2.46
Uspl1Q3ULM6 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.29□□□□□ -2.46
Uspl1Q3ULM6 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.29□□□□□ -2.46
Uspl1Q3ULM6 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.29□□□□□ -2.46
Uspl1Q3ULM6 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.31□□□□□ -2.46
Uspl1Q3ULM6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.31□□□□□ -2.46
Uspl1Q3ULM6 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.31□□□□□ -2.46
Uspl1Q3ULM6 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.31□□□□□ -2.46
Uspl1Q3ULM6 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.32□□□□□ -2.46
Uspl1Q3ULM6 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.32□□□□□ -2.46
Uspl1Q3ULM6 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.32□□□□□ -2.46
Uspl1Q3ULM6 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.33□□□□□ -2.46
Uspl1Q3ULM6 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.33□□□□□ -2.46
Uspl1Q3ULM6 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.33□□□□□ -2.46
Uspl1Q3ULM6 Mir183-201ENSMUST00000083685 70 ntBASIC-0.33□□□□□ -2.46
Uspl1Q3ULM6 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.33□□□□□ -2.46
Uspl1Q3ULM6 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.35□□□□□ -2.47
Uspl1Q3ULM6 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.36□□□□□ -2.47
Uspl1Q3ULM6 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.36□□□□□ -2.47
Uspl1Q3ULM6 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.36□□□□□ -2.47
Uspl1Q3ULM6 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.36□□□□□ -2.47
Uspl1Q3ULM6 Gm25521-201ENSMUST00000158393 108 ntBASIC-0.38□□□□□ -2.47
Uspl1Q3ULM6 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.39□□□□□ -2.47
Uspl1Q3ULM6 Gm25254-201ENSMUST00000157239 104 ntBASIC-0.4□□□□□ -2.47
Uspl1Q3ULM6 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.4□□□□□ -2.47
Uspl1Q3ULM6 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.42□□□□□ -2.48
Uspl1Q3ULM6 Mir379-201ENSMUST00000083564 66 ntBASIC-0.43□□□□□ -2.48
Uspl1Q3ULM6 Mir543-201ENSMUST00000102286 76 ntBASIC-0.44□□□□□ -2.48
Uspl1Q3ULM6 Gm25867-201ENSMUST00000158254 103 ntBASIC-0.45□□□□□ -2.48
Uspl1Q3ULM6 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.46□□□□□ -2.48
Uspl1Q3ULM6 Mir493-201ENSMUST00000103837 83 ntBASIC-0.48□□□□□ -2.49
Uspl1Q3ULM6 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.48□□□□□ -2.49
Uspl1Q3ULM6 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.51□□□□□ -2.49
Uspl1Q3ULM6 Mir574-201ENSMUST00000103854 78 ntBASIC-0.54□□□□□ -2.5
Uspl1Q3ULM6 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.54□□□□□ -2.5
Uspl1Q3ULM6 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.56□□□□□ -2.5
Uspl1Q3ULM6 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-0.56□□□□□ -2.5
Uspl1Q3ULM6 Gm24016-201ENSMUST00000157726 68 ntBASIC-0.57□□□□□ -2.5
Uspl1Q3ULM6 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.58□□□□□ -2.5
Uspl1Q3ULM6 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.58□□□□□ -2.5
Uspl1Q3ULM6 Gm26008-201ENSMUST00000158797 99 ntBASIC-0.6□□□□□ -2.51
Uspl1Q3ULM6 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.6□□□□□ -2.51
Uspl1Q3ULM6 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.61□□□□□ -2.51
Uspl1Q3ULM6 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.62□□□□□ -2.51
Uspl1Q3ULM6 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.63□□□□□ -2.51
Uspl1Q3ULM6 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.64□□□□□ -2.51
Uspl1Q3ULM6 Mir122-201ENSMUST00000083468 66 ntBASIC-0.64□□□□□ -2.51
Uspl1Q3ULM6 Gm27882-201ENSMUST00000184904 74 ntBASIC-0.65□□□□□ -2.51
Uspl1Q3ULM6 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.66□□□□□ -2.52
Uspl1Q3ULM6 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-0.67□□□□□ -2.52
Uspl1Q3ULM6 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.68□□□□□ -2.52
Uspl1Q3ULM6 Gm25248-201ENSMUST00000175473 98 ntBASIC-0.68□□□□□ -2.52
Uspl1Q3ULM6 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.68□□□□□ -2.52
Uspl1Q3ULM6 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.69□□□□□ -2.52
Uspl1Q3ULM6 Gm24631-201ENSMUST00000122765 81 ntBASIC-0.7□□□□□ -2.52
Uspl1Q3ULM6 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.71□□□□□ -2.52
Uspl1Q3ULM6 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.72□□□□□ -2.52
Uspl1Q3ULM6 Gm27671-201ENSMUST00000183739 66 ntBASIC-0.73□□□□□ -2.53
Uspl1Q3ULM6 Gm23707-201ENSMUST00000104366 125 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Mir466o-201ENSMUST00000104832 84 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.77□□□□□ -2.53
Uspl1Q3ULM6 Mir7670-201ENSMUST00000183689 69 ntBASIC-0.79□□□□□ -2.54
Uspl1Q3ULM6 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.8□□□□□ -2.54
Uspl1Q3ULM6 Mir470-201ENSMUST00000093565 75 ntBASIC-0.8□□□□□ -2.54
Uspl1Q3ULM6 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.81□□□□□ -2.54
Uspl1Q3ULM6 Gm24185-201ENSMUST00000122578 105 ntBASIC-0.81□□□□□ -2.54
Uspl1Q3ULM6 Gm23066-201ENSMUST00000158237 71 ntBASIC-0.82□□□□□ -2.54
Uspl1Q3ULM6 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.82□□□□□ -2.54
Uspl1Q3ULM6 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.82□□□□□ -2.54
Uspl1Q3ULM6 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.84□□□□□ -2.54
Uspl1Q3ULM6 Gm23248-201ENSMUST00000083367 108 ntBASIC-0.84□□□□□ -2.54
Uspl1Q3ULM6 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-0.85□□□□□ -2.55
Uspl1Q3ULM6 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-0.85□□□□□ -2.55
Uspl1Q3ULM6 Mir6395-201ENSMUST00000183885 91 ntBASIC-0.86□□□□□ -2.55
Uspl1Q3ULM6 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.88□□□□□ -2.55
Uspl1Q3ULM6 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.9□□□□□ -2.55
Uspl1Q3ULM6 Gm26231-201ENSMUST00000175218 67 ntBASIC-0.91□□□□□ -2.56
Uspl1Q3ULM6 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.91□□□□□ -2.56
Uspl1Q3ULM6 Mir485-201ENSMUST00000093620 73 ntBASIC-0.92□□□□□ -2.56
Uspl1Q3ULM6 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
Uspl1Q3ULM6 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.93□□□□□ -2.56
Uspl1Q3ULM6 Mir154-201ENSMUST00000083514 66 ntBASIC-0.94□□□□□ -2.56
Uspl1Q3ULM6 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Uspl1Q3ULM6 Gm23812-201ENSMUST00000175156 84 ntBASIC-1□□□□□ -2.57
Uspl1Q3ULM6 Gm23374-201ENSMUST00000175408 84 ntBASIC-1□□□□□ -2.57
Uspl1Q3ULM6 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.01□□□□□ -2.57
Uspl1Q3ULM6 Snord8-201ENSMUST00000175303 110 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 163.7 ms