Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.38□□□□□ -2.63
Ercc3P49135 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.39□□□□□ -2.63
Ercc3P49135 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.39□□□□□ -2.63
Ercc3P49135 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.4□□□□□ -2.63
Ercc3P49135 Mir470-201ENSMUST00000093565 75 ntBASIC-1.4□□□□□ -2.63
Ercc3P49135 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.43□□□□□ -2.64
Ercc3P49135 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.43□□□□□ -2.64
Ercc3P49135 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.44□□□□□ -2.64
Ercc3P49135 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.46□□□□□ -2.64
Ercc3P49135 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.49□□□□□ -2.65
Ercc3P49135 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.49□□□□□ -2.65
Ercc3P49135 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.49□□□□□ -2.65
Ercc3P49135 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.49□□□□□ -2.65
Ercc3P49135 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.49□□□□□ -2.65
Ercc3P49135 Mir539-201ENSMUST00000102109 74 ntBASIC-1.52□□□□□ -2.65
Ercc3P49135 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.52□□□□□ -2.65
Ercc3P49135 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.52□□□□□ -2.65
Ercc3P49135 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.54□□□□□ -2.66
Ercc3P49135 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.54□□□□□ -2.66
Ercc3P49135 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.54□□□□□ -2.66
Ercc3P49135 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.54□□□□□ -2.66
Ercc3P49135 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.55□□□□□ -2.66
Ercc3P49135 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.55□□□□□ -2.66
Ercc3P49135 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.56□□□□□ -2.66
Ercc3P49135 Mir367-201ENSMUST00000083479 75 ntBASIC-1.58□□□□□ -2.66
Ercc3P49135 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.59□□□□□ -2.66
Ercc3P49135 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.59□□□□□ -2.66
Ercc3P49135 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.59□□□□□ -2.66
Ercc3P49135 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.6□□□□□ -2.67
Ercc3P49135 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.6□□□□□ -2.67
Ercc3P49135 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.61□□□□□ -2.67
Ercc3P49135 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.62□□□□□ -2.67
Ercc3P49135 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.63□□□□□ -2.67
Ercc3P49135 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.64□□□□□ -2.67
Ercc3P49135 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.65□□□□□ -2.67
Ercc3P49135 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.66□□□□□ -2.68
Ercc3P49135 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.66□□□□□ -2.68
Ercc3P49135 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.66□□□□□ -2.68
Ercc3P49135 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.66□□□□□ -2.68
Ercc3P49135 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.67□□□□□ -2.68
Ercc3P49135 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.68□□□□□ -2.68
Ercc3P49135 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.69□□□□□ -2.68
Ercc3P49135 Mir192-201ENSMUST00000083589 89 ntBASIC-1.69□□□□□ -2.68
Ercc3P49135 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.7□□□□□ -2.68
Ercc3P49135 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.71□□□□□ -2.68
Ercc3P49135 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.71□□□□□ -2.68
Ercc3P49135 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.71□□□□□ -2.68
Ercc3P49135 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.71□□□□□ -2.68
Ercc3P49135 Mir295-201ENSMUST00000104694 69 ntBASIC-1.73□□□□□ -2.69
Ercc3P49135 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.74□□□□□ -2.69
Ercc3P49135 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.74□□□□□ -2.69
Ercc3P49135 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.75□□□□□ -2.69
Ercc3P49135 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.75□□□□□ -2.69
Ercc3P49135 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.75□□□□□ -2.69
Ercc3P49135 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.76□□□□□ -2.69
Ercc3P49135 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.78□□□□□ -2.69
Ercc3P49135 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.79□□□□□ -2.7
Ercc3P49135 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.79□□□□□ -2.7
Ercc3P49135 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.79□□□□□ -2.7
Ercc3P49135 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.79□□□□□ -2.7
Ercc3P49135 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.8□□□□□ -2.7
Ercc3P49135 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.81□□□□□ -2.7
Ercc3P49135 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.82□□□□□ -2.7
Ercc3P49135 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.82□□□□□ -2.7
Ercc3P49135 Gm24396-201ENSMUST00000116905 93 ntBASIC-1.84□□□□□ -2.7
Ercc3P49135 Gm22540-201ENSMUST00000158168 117 ntBASIC-1.85□□□□□ -2.71
Ercc3P49135 Gm22069-201ENSMUST00000179911 107 ntBASIC-1.85□□□□□ -2.71
Ercc3P49135 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.88□□□□□ -2.71
Ercc3P49135 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.89□□□□□ -2.71
Ercc3P49135 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.9□□□□□ -2.71
Ercc3P49135 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.9□□□□□ -2.71
Ercc3P49135 Mir154-201ENSMUST00000083514 66 ntBASIC-1.9□□□□□ -2.71
Ercc3P49135 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.91□□□□□ -2.72
Ercc3P49135 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.92□□□□□ -2.72
Ercc3P49135 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.92□□□□□ -2.72
Ercc3P49135 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-1.93□□□□□ -2.72
Ercc3P49135 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.94□□□□□ -2.72
Ercc3P49135 Gm22943-201ENSMUST00000158564 76 ntBASIC-1.95□□□□□ -2.72
Ercc3P49135 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.95□□□□□ -2.72
Ercc3P49135 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.97□□□□□ -2.72
Ercc3P49135 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.98□□□□□ -2.73
Ercc3P49135 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.99□□□□□ -2.73
Ercc3P49135 Mir493-201ENSMUST00000103837 83 ntBASIC-2.01□□□□□ -2.73
Ercc3P49135 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.04□□□□□ -2.74
Ercc3P49135 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.04□□□□□ -2.74
Ercc3P49135 Gm25524-201ENSMUST00000101821 107 ntBASIC-2.12□□□□□ -2.75
Ercc3P49135 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.13□□□□□ -2.75
Ercc3P49135 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.13□□□□□ -2.75
Ercc3P49135 Gm25950-201ENSMUST00000175331 100 ntBASIC-2.14□□□□□ -2.75
Ercc3P49135 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.14□□□□□ -2.75
Ercc3P49135 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.15□□□□□ -2.75
Ercc3P49135 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.16□□□□□ -2.76
Ercc3P49135 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.18□□□□□ -2.76
Ercc3P49135 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.18□□□□□ -2.76
Ercc3P49135 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.21□□□□□ -2.76
Ercc3P49135 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.21□□□□□ -2.76
Ercc3P49135 Gm23961-201ENSMUST00000104685 97 ntBASIC-2.22□□□□□ -2.76
Ercc3P49135 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.23□□□□□ -2.77
Ercc3P49135 Mir1912-201ENSMUST00000175298 87 ntBASIC-2.28□□□□□ -2.77
Ercc3P49135 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.29□□□□□ -2.78
Retrieved 100 of 76,532 protein–RNA pairs in 246.7 ms