Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.98□□□□□ -2.57
Rfx1P48377 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.98□□□□□ -2.57
Rfx1P48377 Gm22401-201ENSMUST00000174927 117 ntBASIC-1□□□□□ -2.57
Rfx1P48377 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1□□□□□ -2.57
Rfx1P48377 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.01□□□□□ -2.57
Rfx1P48377 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.02□□□□□ -2.57
Rfx1P48377 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.04□□□□□ -2.58
Rfx1P48377 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.04□□□□□ -2.58
Rfx1P48377 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.05□□□□□ -2.58
Rfx1P48377 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.05□□□□□ -2.58
Rfx1P48377 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.05□□□□□ -2.58
Rfx1P48377 Mir543-201ENSMUST00000102286 76 ntBASIC-1.06□□□□□ -2.58
Rfx1P48377 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.06□□□□□ -2.58
Rfx1P48377 Snord123-201ENSMUST00000158692 71 ntBASIC-1.06□□□□□ -2.58
Rfx1P48377 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.07□□□□□ -2.58
Rfx1P48377 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.07□□□□□ -2.58
Rfx1P48377 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.08□□□□□ -2.58
Rfx1P48377 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.1□□□□□ -2.59
Rfx1P48377 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.1□□□□□ -2.59
Rfx1P48377 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.12□□□□□ -2.59
Rfx1P48377 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.12□□□□□ -2.59
Rfx1P48377 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.12□□□□□ -2.59
Rfx1P48377 Mir122-201ENSMUST00000083468 66 ntBASIC-1.13□□□□□ -2.59
Rfx1P48377 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.15□□□□□ -2.59
Rfx1P48377 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.15□□□□□ -2.59
Rfx1P48377 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.15□□□□□ -2.59
Rfx1P48377 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.16□□□□□ -2.6
Rfx1P48377 Mir367-201ENSMUST00000083479 75 ntBASIC-1.17□□□□□ -2.6
Rfx1P48377 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.18□□□□□ -2.6
Rfx1P48377 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.18□□□□□ -2.6
Rfx1P48377 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.22□□□□□ -2.6
Rfx1P48377 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.23□□□□□ -2.61
Rfx1P48377 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.26□□□□□ -2.61
Rfx1P48377 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.27□□□□□ -2.61
Rfx1P48377 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.27□□□□□ -2.61
Rfx1P48377 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.29□□□□□ -2.62
Rfx1P48377 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.29□□□□□ -2.62
Rfx1P48377 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.29□□□□□ -2.62
Rfx1P48377 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.3□□□□□ -2.62
Rfx1P48377 Mir295-201ENSMUST00000104694 69 ntBASIC-1.32□□□□□ -2.62
Rfx1P48377 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Rfx1P48377 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.33□□□□□ -2.62
Rfx1P48377 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.35□□□□□ -2.63
Rfx1P48377 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.37□□□□□ -2.63
Rfx1P48377 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.37□□□□□ -2.63
Rfx1P48377 Mir485-201ENSMUST00000093620 73 ntBASIC-1.37□□□□□ -2.63
Rfx1P48377 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.38□□□□□ -2.63
Rfx1P48377 Mir192-201ENSMUST00000083589 89 ntBASIC-1.38□□□□□ -2.63
Rfx1P48377 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.39□□□□□ -2.63
Rfx1P48377 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.4□□□□□ -2.63
Rfx1P48377 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.41□□□□□ -2.64
Rfx1P48377 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.42□□□□□ -2.64
Rfx1P48377 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.42□□□□□ -2.64
Rfx1P48377 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.42□□□□□ -2.64
Rfx1P48377 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.44□□□□□ -2.64
Rfx1P48377 Mir539-201ENSMUST00000102109 74 ntBASIC-1.47□□□□□ -2.64
Rfx1P48377 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.47□□□□□ -2.64
Rfx1P48377 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.48□□□□□ -2.65
Rfx1P48377 Mir470-201ENSMUST00000093565 75 ntBASIC-1.48□□□□□ -2.65
Rfx1P48377 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.52□□□□□ -2.65
Rfx1P48377 Mir379-201ENSMUST00000083564 66 ntBASIC-1.52□□□□□ -2.65
Rfx1P48377 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.53□□□□□ -2.65
Rfx1P48377 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.54□□□□□ -2.66
Rfx1P48377 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.55□□□□□ -2.66
Rfx1P48377 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.58□□□□□ -2.66
Rfx1P48377 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.61□□□□□ -2.67
Rfx1P48377 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.61□□□□□ -2.67
Rfx1P48377 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.62□□□□□ -2.67
Rfx1P48377 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.63□□□□□ -2.67
Rfx1P48377 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.66□□□□□ -2.68
Rfx1P48377 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.66□□□□□ -2.68
Rfx1P48377 Gm22573-201ENSMUST00000082982 102 ntBASIC-1.66□□□□□ -2.68
Rfx1P48377 Gm22232-201ENSMUST00000104654 94 ntBASIC-1.67□□□□□ -2.68
Rfx1P48377 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.68□□□□□ -2.68
Rfx1P48377 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.69□□□□□ -2.68
Rfx1P48377 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.69□□□□□ -2.68
Rfx1P48377 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.7□□□□□ -2.68
Rfx1P48377 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.71□□□□□ -2.68
Rfx1P48377 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.72□□□□□ -2.68
Rfx1P48377 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.73□□□□□ -2.69
Rfx1P48377 Gm23543-201ENSMUST00000158207 106 ntBASIC-1.76□□□□□ -2.69
Rfx1P48377 Mir7670-201ENSMUST00000183689 69 ntBASIC-1.76□□□□□ -2.69
Rfx1P48377 Gm23556-201ENSMUST00000157821 92 ntBASIC-1.77□□□□□ -2.69
Rfx1P48377 Gm23707-201ENSMUST00000104366 125 ntBASIC-1.78□□□□□ -2.69
Rfx1P48377 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.78□□□□□ -2.69
Rfx1P48377 Gm24185-201ENSMUST00000122578 105 ntBASIC-1.81□□□□□ -2.7
Rfx1P48377 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.82□□□□□ -2.7
Rfx1P48377 Gm26259-201ENSMUST00000104778 97 ntBASIC-1.84□□□□□ -2.7
Rfx1P48377 Gm23428-201ENSMUST00000122488 102 ntBASIC-1.89□□□□□ -2.71
Rfx1P48377 Gm22296-201ENSMUST00000083310 103 ntBASIC-1.9□□□□□ -2.71
Rfx1P48377 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.91□□□□□ -2.72
Rfx1P48377 Gm24016-201ENSMUST00000157726 68 ntBASIC-1.93□□□□□ -2.72
Rfx1P48377 Gm22925-201ENSMUST00000174956 102 ntBASIC-1.95□□□□□ -2.72
Rfx1P48377 Gm24631-201ENSMUST00000122765 81 ntBASIC-1.98□□□□□ -2.73
Rfx1P48377 Gm23066-201ENSMUST00000158237 71 ntBASIC-1.98□□□□□ -2.73
Rfx1P48377 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.02□□□□□ -2.73
Rfx1P48377 Mir493-201ENSMUST00000103837 83 ntBASIC-2.04□□□□□ -2.74
Rfx1P48377 Mir664-201ENSMUST00000196796 69 ntBASIC-2.05□□□□□ -2.74
Rfx1P48377 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.07□□□□□ -2.74
Rfx1P48377 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms