Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.68□□□□□ -2.84
Lire1P11260 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.69□□□□□ -2.84
Lire1P11260 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.69□□□□□ -2.84
Lire1P11260 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.7□□□□□ -2.84
Lire1P11260 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.71□□□□□ -2.84
Lire1P11260 Gm22845-201ENSMUST00000157712 104 ntBASIC-2.72□□□□□ -2.84
Lire1P11260 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.72□□□□□ -2.84
Lire1P11260 Gm44481-201ENSMUST00000197288 84 ntBASIC-2.72□□□□□ -2.84
Lire1P11260 Gm25815-201ENSMUST00000082755 107 ntBASIC-2.73□□□□□ -2.85
Lire1P11260 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.74□□□□□ -2.85
Lire1P11260 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.74□□□□□ -2.85
Lire1P11260 CT571266.1-201ENSMUST00000222859 153 ntBASIC-2.74□□□□□ -2.85
Lire1P11260 Gm22381-201ENSMUST00000158186 107 ntBASIC-2.75□□□□□ -2.85
Lire1P11260 Gm22251-201ENSMUST00000083216 107 ntBASIC-2.75□□□□□ -2.85
Lire1P11260 Mir1187-201ENSMUST00000116936 122 ntBASIC-2.76□□□□□ -2.85
Lire1P11260 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.77□□□□□ -2.85
Lire1P11260 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.77□□□□□ -2.85
Lire1P11260 Mir351-201ENSMUST00000083569 99 ntBASIC-2.77□□□□□ -2.85
Lire1P11260 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.81□□□□□ -2.86
Lire1P11260 Mir493-201ENSMUST00000103837 83 ntBASIC-2.82□□□□□ -2.86
Lire1P11260 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.82□□□□□ -2.86
Lire1P11260 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.82□□□□□ -2.86
Lire1P11260 Gm23652-201ENSMUST00000116752 107 ntBASIC-2.85□□□□□ -2.87
Lire1P11260 Gm25428-201ENSMUST00000157608 114 ntBASIC-2.86□□□□□ -2.87
Lire1P11260 Snord50a-201ENSMUST00000178154 72 ntBASIC-2.87□□□□□ -2.87
Lire1P11260 Gm24463-201ENSMUST00000178417 72 ntBASIC-2.87□□□□□ -2.87
Lire1P11260 Gm44339-201ENSMUST00000200598 84 ntBASIC-2.87□□□□□ -2.87
Lire1P11260 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.88□□□□□ -2.87
Lire1P11260 Gm23038-201ENSMUST00000083873 104 ntBASIC-2.89□□□□□ -2.87
Lire1P11260 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.91□□□□□ -2.88
Lire1P11260 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.92□□□□□ -2.88
Lire1P11260 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.93□□□□□ -2.88
Lire1P11260 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.94□□□□□ -2.88
Lire1P11260 Mir154-201ENSMUST00000083514 66 ntBASIC-2.94□□□□□ -2.88
Lire1P11260 Gm24482-201ENSMUST00000117005 93 ntBASIC-2.96□□□□□ -2.88
Lire1P11260 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.96□□□□□ -2.88
Lire1P11260 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.96□□□□□ -2.88
Lire1P11260 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.98□□□□□ -2.89
Lire1P11260 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.98□□□□□ -2.89
Lire1P11260 Gm25681-201ENSMUST00000083938 106 ntBASIC-2.98□□□□□ -2.89
Lire1P11260 Gm23653-201ENSMUST00000116751 97 ntBASIC-3□□□□□ -2.89
Lire1P11260 Gm24651-201ENSMUST00000157107 107 ntBASIC-3□□□□□ -2.89
Lire1P11260 Gm23676-201ENSMUST00000157314 105 ntBASIC-3□□□□□ -2.89
Lire1P11260 Gm22950-201ENSMUST00000082776 107 ntBASIC-3□□□□□ -2.89
Lire1P11260 Gm22056-201ENSMUST00000083386 81 ntBASIC-3□□□□□ -2.89
Lire1P11260 Gm24226-201ENSMUST00000158826 97 ntBASIC-3.01□□□□□ -2.89
Lire1P11260 Gm25022-201ENSMUST00000102205 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-3.02□□□□□ -2.89
Lire1P11260 Gm26139-201ENSMUST00000180098 107 ntBASIC-3.04□□□□□ -2.9
Lire1P11260 Gm24586-201ENSMUST00000116695 89 ntBASIC-3.05□□□□□ -2.9
Lire1P11260 Mir664-201ENSMUST00000196796 69 ntBASIC-3.05□□□□□ -2.9
Lire1P11260 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-3.06□□□□□ -2.9
Lire1P11260 Gm22260-201ENSMUST00000178643 107 ntBASIC-3.06□□□□□ -2.9
Lire1P11260 Gm22071-201ENSMUST00000116857 83 ntBASIC-3.1□□□□□ -2.91
Lire1P11260 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3.11□□□□□ -2.91
Lire1P11260 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3.11□□□□□ -2.91
Lire1P11260 Gm25222-201ENSMUST00000158199 126 ntBASIC-3.11□□□□□ -2.91
Lire1P11260 Gm23293-201ENSMUST00000082552 104 ntBASIC-3.12□□□□□ -2.91
Lire1P11260 Gm24410-201ENSMUST00000083433 107 ntBASIC-3.12□□□□□ -2.91
Lire1P11260 Gm25382-201ENSMUST00000157811 97 ntBASIC-3.14□□□□□ -2.91
Lire1P11260 Gm23785-201ENSMUST00000116741 96 ntBASIC-3.15□□□□□ -2.91
Lire1P11260 Gm22039-201ENSMUST00000157278 132 ntBASIC-3.15□□□□□ -2.91
Lire1P11260 Gm22925-201ENSMUST00000174956 102 ntBASIC-3.15□□□□□ -2.91
Lire1P11260 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.16□□□□□ -2.92
Lire1P11260 Gm25465-201ENSMUST00000157716 105 ntBASIC-3.16□□□□□ -2.92
Lire1P11260 Gm22401-201ENSMUST00000174927 117 ntBASIC-3.16□□□□□ -2.92
Lire1P11260 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.17□□□□□ -2.92
Lire1P11260 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.17□□□□□ -2.92
Lire1P11260 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-3.19□□□□□ -2.92
Lire1P11260 Snord58b-201ENSMUST00000082937 66 ntBASIC-3.19□□□□□ -2.92
Lire1P11260 Gm24710-201ENSMUST00000175235 101 ntBASIC-3.24□□□□□ -2.93
Lire1P11260 Gm24135-201ENSMUST00000179085 101 ntBASIC-3.24□□□□□ -2.93
Lire1P11260 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-3.25□□□□□ -2.93
Lire1P11260 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.27□□□□□ -2.93
Lire1P11260 Gm22679-201ENSMUST00000116975 100 ntBASIC-3.3□□□□□ -2.94
Lire1P11260 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-3.3□□□□□ -2.94
Lire1P11260 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.32□□□□□ -2.94
Lire1P11260 Gm24387-201ENSMUST00000104625 90 ntBASIC-3.35□□□□□ -2.95
Lire1P11260 Gm44385-201ENSMUST00000198781 81 ntBASIC-3.39□□□□□ -2.95
Lire1P11260 Gm26227-201ENSMUST00000082510 101 ntBASIC-3.39□□□□□ -2.95
Lire1P11260 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-3.41□□□□□ -2.96
Lire1P11260 Gm22078-201ENSMUST00000157593 103 ntBASIC-3.41□□□□□ -2.96
Lire1P11260 Gm22474-201ENSMUST00000179407 107 ntBASIC-3.42□□□□□ -2.96
Lire1P11260 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.45□□□□□ -2.96
Lire1P11260 Gm23961-201ENSMUST00000104685 97 ntBASIC-3.46□□□□□ -2.96
Lire1P11260 Mir466l-201ENSMUST00000104866 121 ntBASIC-3.55□□□□□ -2.98
Lire1P11260 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.55□□□□□ -2.98
Lire1P11260 Mir34c-201ENSMUST00000083653 77 ntBASIC-3.55□□□□□ -2.98
Lire1P11260 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.57□□□□□ -2.98
Lire1P11260 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.6□□□□□ -2.99
Lire1P11260 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.64□□□□□ -2.99
Lire1P11260 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.64□□□□□ -2.99
Retrieved 100 of 76,532 protein–RNA pairs in 208.5 ms