Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.27□□□□□ -2.45
Hoxd3P09027 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.29□□□□□ -2.46
Hoxd3P09027 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.29□□□□□ -2.46
Hoxd3P09027 Mir7681-201ENSMUST00000184834 72 ntBASIC-0.29□□□□□ -2.46
Hoxd3P09027 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.3□□□□□ -2.46
Hoxd3P09027 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.3□□□□□ -2.46
Hoxd3P09027 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.3□□□□□ -2.46
Hoxd3P09027 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.31□□□□□ -2.46
Hoxd3P09027 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.33□□□□□ -2.46
Hoxd3P09027 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.34□□□□□ -2.46
Hoxd3P09027 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.34□□□□□ -2.46
Hoxd3P09027 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.34□□□□□ -2.46
Hoxd3P09027 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.34□□□□□ -2.46
Hoxd3P09027 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.35□□□□□ -2.47
Hoxd3P09027 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.35□□□□□ -2.47
Hoxd3P09027 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.36□□□□□ -2.47
Hoxd3P09027 Mir539-201ENSMUST00000102109 74 ntBASIC-0.37□□□□□ -2.47
Hoxd3P09027 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.37□□□□□ -2.47
Hoxd3P09027 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.38□□□□□ -2.47
Hoxd3P09027 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.38□□□□□ -2.47
Hoxd3P09027 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.39□□□□□ -2.47
Hoxd3P09027 Gm23543-201ENSMUST00000158207 106 ntBASIC-0.39□□□□□ -2.47
Hoxd3P09027 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.39□□□□□ -2.47
Hoxd3P09027 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.4□□□□□ -2.47
Hoxd3P09027 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.4□□□□□ -2.47
Hoxd3P09027 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.4□□□□□ -2.47
Hoxd3P09027 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.41□□□□□ -2.48
Hoxd3P09027 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.42□□□□□ -2.48
Hoxd3P09027 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.42□□□□□ -2.48
Hoxd3P09027 Snord8-201ENSMUST00000175303 110 ntBASIC-0.43□□□□□ -2.48
Hoxd3P09027 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.44□□□□□ -2.48
Hoxd3P09027 Gm22313-201ENSMUST00000158008 129 ntBASIC-0.44□□□□□ -2.48
Hoxd3P09027 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
Hoxd3P09027 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.45□□□□□ -2.48
Hoxd3P09027 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.46□□□□□ -2.48
Hoxd3P09027 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.46□□□□□ -2.48
Hoxd3P09027 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.46□□□□□ -2.48
Hoxd3P09027 Snord123-201ENSMUST00000158692 71 ntBASIC-0.47□□□□□ -2.48
Hoxd3P09027 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.47□□□□□ -2.48
Hoxd3P09027 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.47□□□□□ -2.48
Hoxd3P09027 Gm23125-201ENSMUST00000157651 106 ntBASIC-0.48□□□□□ -2.49
Hoxd3P09027 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.49□□□□□ -2.49
Hoxd3P09027 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.49□□□□□ -2.49
Hoxd3P09027 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.49□□□□□ -2.49
Hoxd3P09027 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.5□□□□□ -2.49
Hoxd3P09027 Gm23556-201ENSMUST00000157821 92 ntBASIC-0.5□□□□□ -2.49
Hoxd3P09027 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.51□□□□□ -2.49
Hoxd3P09027 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.52□□□□□ -2.49
Hoxd3P09027 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.54□□□□□ -2.5
Hoxd3P09027 Mir664-201ENSMUST00000196796 69 ntBASIC-0.54□□□□□ -2.5
Hoxd3P09027 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.54□□□□□ -2.5
Hoxd3P09027 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.56□□□□□ -2.5
Hoxd3P09027 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.56□□□□□ -2.5
Hoxd3P09027 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.56□□□□□ -2.5
Hoxd3P09027 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.58□□□□□ -2.5
Hoxd3P09027 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.6□□□□□ -2.51
Hoxd3P09027 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.61□□□□□ -2.51
Hoxd3P09027 Mir543-201ENSMUST00000102286 76 ntBASIC-0.62□□□□□ -2.51
Hoxd3P09027 Gm27366-201ENSMUST00000184967 108 ntBASIC-0.62□□□□□ -2.51
Hoxd3P09027 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.62□□□□□ -2.51
Hoxd3P09027 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
Hoxd3P09027 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
Hoxd3P09027 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
Hoxd3P09027 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.65□□□□□ -2.51
Hoxd3P09027 Gm22573-201ENSMUST00000082982 102 ntBASIC-0.65□□□□□ -2.51
Hoxd3P09027 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.66□□□□□ -2.52
Hoxd3P09027 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.67□□□□□ -2.52
Hoxd3P09027 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.67□□□□□ -2.52
Hoxd3P09027 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.68□□□□□ -2.52
Hoxd3P09027 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.68□□□□□ -2.52
Hoxd3P09027 Gm25626-201ENSMUST00000177631 107 ntBASIC-0.71□□□□□ -2.52
Hoxd3P09027 Gm22783-201ENSMUST00000104089 107 ntBASIC-0.72□□□□□ -2.52
Hoxd3P09027 Gm23316-201ENSMUST00000157997 114 ntBASIC-0.72□□□□□ -2.52
Hoxd3P09027 Mir1912-201ENSMUST00000175298 87 ntBASIC-0.72□□□□□ -2.52
Hoxd3P09027 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.73□□□□□ -2.53
Hoxd3P09027 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.73□□□□□ -2.53
Hoxd3P09027 Mir122-201ENSMUST00000083468 66 ntBASIC-0.76□□□□□ -2.53
Hoxd3P09027 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.78□□□□□ -2.53
Hoxd3P09027 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Hoxd3P09027 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-0.8□□□□□ -2.54
Hoxd3P09027 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.8□□□□□ -2.54
Hoxd3P09027 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.83□□□□□ -2.54
Hoxd3P09027 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.86□□□□□ -2.55
Hoxd3P09027 Mir379-201ENSMUST00000083564 66 ntBASIC-0.86□□□□□ -2.55
Hoxd3P09027 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.89□□□□□ -2.55
Hoxd3P09027 Gm44351-201ENSMUST00000200090 95 ntBASIC-0.93□□□□□ -2.56
Hoxd3P09027 Gm25521-201ENSMUST00000158393 108 ntBASIC-0.94□□□□□ -2.56
Hoxd3P09027 Gm23637-201ENSMUST00000175075 94 ntBASIC-0.94□□□□□ -2.56
Hoxd3P09027 Mir466o-201ENSMUST00000104832 84 ntBASIC-0.96□□□□□ -2.56
Hoxd3P09027 Gm23428-201ENSMUST00000122488 102 ntBASIC-0.96□□□□□ -2.56
Hoxd3P09027 Gm22296-201ENSMUST00000083310 103 ntBASIC-0.96□□□□□ -2.56
Hoxd3P09027 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.97□□□□□ -2.56
Hoxd3P09027 Mir485-201ENSMUST00000093620 73 ntBASIC-0.98□□□□□ -2.57
Hoxd3P09027 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.99□□□□□ -2.57
Hoxd3P09027 Gm26122-201ENSMUST00000083362 82 ntBASIC-0.99□□□□□ -2.57
Hoxd3P09027 Gm22183-201ENSMUST00000175420 73 ntBASIC-1□□□□□ -2.57
Hoxd3P09027 Mir335-201ENSMUST00000083567 98 ntBASIC-1□□□□□ -2.57
Hoxd3P09027 Mir470-201ENSMUST00000093565 75 ntBASIC-1□□□□□ -2.57
Hoxd3P09027 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.01□□□□□ -2.57
Hoxd3P09027 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms