Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25812-201ENSMUST00000082751 103 ntBASIC-4.56□□□□□ -3.14
Hmgb3O54879 Gm23644-201ENSMUST00000157856 77 ntBASIC-4.6□□□□□ -3.15
Hmgb3O54879 Gm27882-201ENSMUST00000184904 74 ntBASIC-4.6□□□□□ -3.15
Hmgb3O54879 Gm27450-201ENSMUST00000104632 90 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-4.62□□□□□ -3.15
Hmgb3O54879 Gm24234-201ENSMUST00000104316 107 ntBASIC-4.63□□□□□ -3.15
Hmgb3O54879 Gm26052-201ENSMUST00000104646 84 ntBASIC-4.63□□□□□ -3.15
Hmgb3O54879 AC157278.1-201ENSMUST00000221621 148 ntBASIC-4.68□□□□□ -3.16
Hmgb3O54879 Gm22213-201ENSMUST00000157564 119 ntBASIC-4.69□□□□□ -3.16
Hmgb3O54879 Mir6481-201ENSMUST00000184617 110 ntBASIC-4.69□□□□□ -3.16
Hmgb3O54879 n-R5s218-201ENSMUST00000122583 109 ntBASIC-4.73□□□□□ -3.17
Hmgb3O54879 Gm26485-201ENSMUST00000158019 64 ntBASIC-4.73□□□□□ -3.17
Hmgb3O54879 Gm26139-201ENSMUST00000180098 107 ntBASIC-4.74□□□□□ -3.17
Hmgb3O54879 Mir467g-201ENSMUST00000116906 120 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Mir1187-201ENSMUST00000116936 122 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Gm24167-201ENSMUST00000177733 124 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Gm24028-201ENSMUST00000178991 124 ntBASIC-4.75□□□□□ -3.17
Hmgb3O54879 Mir1955-201ENSMUST00000158014 98 ntBASIC-4.76□□□□□ -3.17
Hmgb3O54879 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-4.77□□□□□ -3.17
Hmgb3O54879 Gm25509-201ENSMUST00000116985 106 ntBASIC-4.78□□□□□ -3.17
Hmgb3O54879 Gm22056-201ENSMUST00000083386 81 ntBASIC-4.78□□□□□ -3.17
Hmgb3O54879 Gm23966-201ENSMUST00000179823 107 ntBASIC-4.79□□□□□ -3.18
Hmgb3O54879 Gm24226-201ENSMUST00000158826 97 ntBASIC-4.8□□□□□ -3.18
Hmgb3O54879 Gm11966-201ENSMUST00000119907 87 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Gm23350-201ENSMUST00000158429 103 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Mir664-201ENSMUST00000196796 69 ntBASIC-4.81□□□□□ -3.18
Hmgb3O54879 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-4.83□□□□□ -3.18
Hmgb3O54879 Gm25681-201ENSMUST00000083938 106 ntBASIC-4.85□□□□□ -3.19
Hmgb3O54879 Gm24651-201ENSMUST00000157107 107 ntBASIC-4.87□□□□□ -3.19
Hmgb3O54879 Gm23578-201ENSMUST00000103943 104 ntBASIC-4.88□□□□□ -3.19
Hmgb3O54879 Gm25465-201ENSMUST00000157716 105 ntBASIC-4.89□□□□□ -3.19
Hmgb3O54879 Gm22039-201ENSMUST00000157278 132 ntBASIC-4.93□□□□□ -3.2
Hmgb3O54879 Gm22260-201ENSMUST00000178643 107 ntBASIC-4.93□□□□□ -3.2
Hmgb3O54879 Mir450b-201ENSMUST00000102095 82 ntBASIC-4.94□□□□□ -3.2
Hmgb3O54879 Gm22925-201ENSMUST00000174956 102 ntBASIC-4.96□□□□□ -3.2
Hmgb3O54879 Gm23678-201ENSMUST00000083157 107 ntBASIC-4.98□□□□□ -3.21
Hmgb3O54879 Gm24710-201ENSMUST00000175235 101 ntBASIC-4.99□□□□□ -3.21
Hmgb3O54879 Gm24135-201ENSMUST00000179085 101 ntBASIC-4.99□□□□□ -3.21
Hmgb3O54879 Gm22845-201ENSMUST00000157712 104 ntBASIC-5□□□□□ -3.21
Hmgb3O54879 Gm25867-201ENSMUST00000158254 103 ntBASIC-5.02□□□□□ -3.21
Hmgb3O54879 Gm24605-201ENSMUST00000104772 96 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm23785-201ENSMUST00000116741 96 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm23652-201ENSMUST00000116752 107 ntBASIC-5.04□□□□□ -3.22
Hmgb3O54879 Gm22195-201ENSMUST00000116861 108 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm22251-201ENSMUST00000083216 107 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm25987-201ENSMUST00000083234 107 ntBASIC-5.07□□□□□ -3.22
Hmgb3O54879 Gm25222-201ENSMUST00000158199 126 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Snord50a-201ENSMUST00000178154 72 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Gm24463-201ENSMUST00000178417 72 ntBASIC-5.1□□□□□ -3.23
Hmgb3O54879 Gm26008-201ENSMUST00000158797 99 ntBASIC-5.12□□□□□ -3.23
Hmgb3O54879 Gm23293-201ENSMUST00000082552 104 ntBASIC-5.14□□□□□ -3.23
Hmgb3O54879 Gm24148-201ENSMUST00000082762 80 ntBASIC-5.17□□□□□ -3.24
Hmgb3O54879 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-5.18□□□□□ -3.24
Hmgb3O54879 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Mir7116-201ENSMUST00000195956 70 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Gm23038-201ENSMUST00000083873 104 ntBASIC-5.24□□□□□ -3.25
Hmgb3O54879 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-5.25□□□□□ -3.25
Hmgb3O54879 Snord58b-201ENSMUST00000082937 66 ntBASIC-5.26□□□□□ -3.25
Hmgb3O54879 Gm25382-201ENSMUST00000157811 97 ntBASIC-5.3□□□□□ -3.26
Hmgb3O54879 Gm22078-201ENSMUST00000157593 103 ntBASIC-5.31□□□□□ -3.26
Hmgb3O54879 Gm25815-201ENSMUST00000082755 107 ntBASIC-5.31□□□□□ -3.26
Hmgb3O54879 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-5.33□□□□□ -3.26
Hmgb3O54879 Gm22474-201ENSMUST00000179407 107 ntBASIC-5.34□□□□□ -3.26
Hmgb3O54879 Gm22950-201ENSMUST00000082776 107 ntBASIC-5.35□□□□□ -3.27
Hmgb3O54879 Gm20734-201ENSMUST00000216939 193 ntBASIC-5.39□□□□□ -3.27
Hmgb3O54879 Gm23210-201ENSMUST00000158668 98 ntBASIC-5.4□□□□□ -3.27
Hmgb3O54879 Gm26306-201ENSMUST00000157773 119 ntBASIC-5.46□□□□□ -3.28
Hmgb3O54879 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-5.48□□□□□ -3.29
Hmgb3O54879 Gm25022-201ENSMUST00000102205 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Gm22679-201ENSMUST00000116975 100 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-5.49□□□□□ -3.29
Hmgb3O54879 Gm24387-201ENSMUST00000104625 90 ntBASIC-5.54□□□□□ -3.3
Hmgb3O54879 Gm27671-201ENSMUST00000183739 66 ntBASIC-5.55□□□□□ -3.3
Hmgb3O54879 Gm26227-201ENSMUST00000082510 101 ntBASIC-5.55□□□□□ -3.3
Hmgb3O54879 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-5.56□□□□□ -3.3
Hmgb3O54879 Gm24410-201ENSMUST00000083433 107 ntBASIC-5.63□□□□□ -3.31
Hmgb3O54879 Gm23961-201ENSMUST00000104685 97 ntBASIC-5.67□□□□□ -3.32
Hmgb3O54879 Gm22381-201ENSMUST00000158186 107 ntBASIC-5.67□□□□□ -3.32
Hmgb3O54879 Mir7681-201ENSMUST00000184834 72 ntBASIC-5.73□□□□□ -3.33
Hmgb3O54879 Gm24590-201ENSMUST00000116699 119 ntBASIC-5.74□□□□□ -3.33
Hmgb3O54879 Gm44353-201ENSMUST00000200618 138 ntBASIC-5.75□□□□□ -3.33
Hmgb3O54879 Gm22301-201ENSMUST00000082656 107 ntBASIC-5.76□□□□□ -3.33
Hmgb3O54879 Gm22127-201ENSMUST00000083239 106 ntBASIC-5.77□□□□□ -3.33
Hmgb3O54879 Gm24482-201ENSMUST00000117005 93 ntBASIC-5.78□□□□□ -3.33
Hmgb3O54879 AL929417.1-201ENSMUST00000214901 124 ntBASIC-5.82□□□□□ -3.34
Hmgb3O54879 Gm22550-201ENSMUST00000179774 107 ntBASIC-5.83□□□□□ -3.34
Hmgb3O54879 Gm22060-201ENSMUST00000082558 107 ntBASIC-5.83□□□□□ -3.34
Hmgb3O54879 Mir34c-201ENSMUST00000083653 77 ntBASIC-5.87□□□□□ -3.35
Hmgb3O54879 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.89□□□□□ -3.35
Hmgb3O54879 n-R5s214-201ENSMUST00000122494 121 ntBASIC-5.93□□□□□ -3.36
Hmgb3O54879 Gm25524-201ENSMUST00000101821 107 ntBASIC-5.94□□□□□ -3.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms