Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.01□□□□□ -2.73
Capn1O35350 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.03□□□□□ -2.73
Capn1O35350 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-2.04□□□□□ -2.74
Capn1O35350 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.04□□□□□ -2.74
Capn1O35350 Gm23335-201ENSMUST00000117021 90 ntBASIC-2.04□□□□□ -2.74
Capn1O35350 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.05□□□□□ -2.74
Capn1O35350 Gm22357-201ENSMUST00000082882 83 ntBASIC-2.05□□□□□ -2.74
Capn1O35350 Mir485-201ENSMUST00000093620 73 ntBASIC-2.05□□□□□ -2.74
Capn1O35350 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.06□□□□□ -2.74
Capn1O35350 Mir192-201ENSMUST00000083589 89 ntBASIC-2.06□□□□□ -2.74
Capn1O35350 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.07□□□□□ -2.74
Capn1O35350 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.08□□□□□ -2.74
Capn1O35350 Gm24226-201ENSMUST00000158826 97 ntBASIC-2.08□□□□□ -2.74
Capn1O35350 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.08□□□□□ -2.74
Capn1O35350 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.08□□□□□ -2.74
Capn1O35350 Mir34c-201ENSMUST00000083653 77 ntBASIC-2.08□□□□□ -2.74
Capn1O35350 Gm44347-201ENSMUST00000199602 108 ntBASIC-2.09□□□□□ -2.74
Capn1O35350 Mir335-201ENSMUST00000083567 98 ntBASIC-2.09□□□□□ -2.74
Capn1O35350 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.12□□□□□ -2.75
Capn1O35350 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.12□□□□□ -2.75
Capn1O35350 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.14□□□□□ -2.75
Capn1O35350 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-2.14□□□□□ -2.75
Capn1O35350 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.16□□□□□ -2.76
Capn1O35350 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.17□□□□□ -2.76
Capn1O35350 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.17□□□□□ -2.76
Capn1O35350 Gm25847-201ENSMUST00000116793 96 ntBASIC-2.18□□□□□ -2.76
Capn1O35350 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.18□□□□□ -2.76
Capn1O35350 Gm24646-201ENSMUST00000157109 99 ntBASIC-2.2□□□□□ -2.76
Capn1O35350 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.21□□□□□ -2.76
Capn1O35350 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.22□□□□□ -2.76
Capn1O35350 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.23□□□□□ -2.77
Capn1O35350 Mir351-201ENSMUST00000083569 99 ntBASIC-2.25□□□□□ -2.77
Capn1O35350 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.26□□□□□ -2.77
Capn1O35350 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.27□□□□□ -2.77
Capn1O35350 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.28□□□□□ -2.77
Capn1O35350 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.28□□□□□ -2.77
Capn1O35350 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.3□□□□□ -2.78
Capn1O35350 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.3□□□□□ -2.78
Capn1O35350 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.31□□□□□ -2.78
Capn1O35350 Gm22033-201ENSMUST00000116947 90 ntBASIC-2.32□□□□□ -2.78
Capn1O35350 Gm22078-201ENSMUST00000157593 103 ntBASIC-2.32□□□□□ -2.78
Capn1O35350 Mir295-201ENSMUST00000104694 69 ntBASIC-2.33□□□□□ -2.78
Capn1O35350 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.33□□□□□ -2.78
Capn1O35350 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.33□□□□□ -2.78
Capn1O35350 Gm25465-201ENSMUST00000157716 105 ntBASIC-2.34□□□□□ -2.78
Capn1O35350 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.37□□□□□ -2.79
Capn1O35350 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.37□□□□□ -2.79
Capn1O35350 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.37□□□□□ -2.79
Capn1O35350 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.39□□□□□ -2.79
Capn1O35350 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.4□□□□□ -2.79
Capn1O35350 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.41□□□□□ -2.8
Capn1O35350 Gm22071-201ENSMUST00000116857 83 ntBASIC-2.45□□□□□ -2.8
Capn1O35350 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.47□□□□□ -2.8
Capn1O35350 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.47□□□□□ -2.8
Capn1O35350 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.47□□□□□ -2.8
Capn1O35350 Gm22067-201ENSMUST00000122790 107 ntBASIC-2.48□□□□□ -2.81
Capn1O35350 Gm22879-201ENSMUST00000082895 74 ntBASIC-2.48□□□□□ -2.81
Capn1O35350 Gm23787-201ENSMUST00000122538 73 ntBASIC-2.49□□□□□ -2.81
Capn1O35350 Gm25143-201ENSMUST00000082696 109 ntBASIC-2.5□□□□□ -2.81
Capn1O35350 Mir6395-201ENSMUST00000183885 91 ntBASIC-2.51□□□□□ -2.81
Capn1O35350 Gm26052-201ENSMUST00000104646 84 ntBASIC-2.53□□□□□ -2.81
Capn1O35350 Gm23315-201ENSMUST00000158003 109 ntBASIC-2.54□□□□□ -2.82
Capn1O35350 Gm24502-201ENSMUST00000158453 105 ntBASIC-2.54□□□□□ -2.82
Capn1O35350 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.55□□□□□ -2.82
Capn1O35350 Gm23826-201ENSMUST00000157394 119 ntBASIC-2.56□□□□□ -2.82
Capn1O35350 Mir493-201ENSMUST00000103837 83 ntBASIC-2.58□□□□□ -2.82
Capn1O35350 Gm25045-201ENSMUST00000122670 99 ntBASIC-2.58□□□□□ -2.82
Capn1O35350 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.58□□□□□ -2.82
Capn1O35350 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.66□□□□□ -2.84
Capn1O35350 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.66□□□□□ -2.84
Capn1O35350 Gm24710-201ENSMUST00000175235 101 ntBASIC-2.66□□□□□ -2.84
Capn1O35350 Gm24135-201ENSMUST00000179085 101 ntBASIC-2.66□□□□□ -2.84
Capn1O35350 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.68□□□□□ -2.84
Capn1O35350 Gm22401-201ENSMUST00000174927 117 ntBASIC-2.68□□□□□ -2.84
Capn1O35350 Gm23237-201ENSMUST00000104639 92 ntBASIC-2.69□□□□□ -2.84
Capn1O35350 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.69□□□□□ -2.84
Capn1O35350 Gm27882-201ENSMUST00000184904 74 ntBASIC-2.69□□□□□ -2.84
Capn1O35350 Mir124a-1-201ENSMUST00000083663 85 ntBASIC-2.71□□□□□ -2.84
Capn1O35350 Mir154-201ENSMUST00000083514 66 ntBASIC-2.72□□□□□ -2.84
Capn1O35350 Gm24396-201ENSMUST00000116905 93 ntBASIC-2.73□□□□□ -2.85
Capn1O35350 Gm25354-201ENSMUST00000179110 105 ntBASIC-2.74□□□□□ -2.85
Capn1O35350 Gm27645-201ENSMUST00000183348 77 ntBASIC-2.74□□□□□ -2.85
Capn1O35350 Gm22474-201ENSMUST00000179407 107 ntBASIC-2.75□□□□□ -2.85
Capn1O35350 Mir1955-201ENSMUST00000158014 98 ntBASIC-2.81□□□□□ -2.86
Capn1O35350 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-2.82□□□□□ -2.86
Capn1O35350 Gm24651-201ENSMUST00000157107 107 ntBASIC-2.82□□□□□ -2.86
Capn1O35350 Gm22540-201ENSMUST00000158168 117 ntBASIC-2.82□□□□□ -2.86
Capn1O35350 Gm22056-201ENSMUST00000083386 81 ntBASIC-2.84□□□□□ -2.86
Capn1O35350 Mir466b-2-201ENSMUST00000103778 82 ntBASIC-2.88□□□□□ -2.87
Capn1O35350 Gm25222-201ENSMUST00000158199 126 ntBASIC-2.88□□□□□ -2.87
Capn1O35350 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-2.88□□□□□ -2.87
Capn1O35350 Gm22260-201ENSMUST00000178643 107 ntBASIC-2.89□□□□□ -2.87
Capn1O35350 Mir664-201ENSMUST00000196796 69 ntBASIC-2.89□□□□□ -2.87
Capn1O35350 Gm25524-201ENSMUST00000101821 107 ntBASIC-2.91□□□□□ -2.88
Capn1O35350 Gm22069-201ENSMUST00000179911 107 ntBASIC-2.91□□□□□ -2.88
Capn1O35350 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-2.93□□□□□ -2.88
Capn1O35350 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-2.93□□□□□ -2.88
Capn1O35350 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.97□□□□□ -2.88
Capn1O35350 Mir1912-201ENSMUST00000175298 87 ntBASIC-3□□□□□ -2.89
Capn1O35350 Gm25867-201ENSMUST00000158254 103 ntBASIC-3.04□□□□□ -2.9
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms