Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.35□□□□□ -2.63
Trim55G3X8Y1 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.35□□□□□ -2.63
Trim55G3X8Y1 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.35□□□□□ -2.63
Trim55G3X8Y1 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.36□□□□□ -2.63
Trim55G3X8Y1 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.39□□□□□ -2.63
Trim55G3X8Y1 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.39□□□□□ -2.63
Trim55G3X8Y1 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.39□□□□□ -2.63
Trim55G3X8Y1 Mir295-201ENSMUST00000104694 69 ntBASIC-1.4□□□□□ -2.63
Trim55G3X8Y1 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.4□□□□□ -2.63
Trim55G3X8Y1 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.4□□□□□ -2.63
Trim55G3X8Y1 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.41□□□□□ -2.64
Trim55G3X8Y1 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.41□□□□□ -2.64
Trim55G3X8Y1 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.41□□□□□ -2.64
Trim55G3X8Y1 Mir367-201ENSMUST00000083479 75 ntBASIC-1.42□□□□□ -2.64
Trim55G3X8Y1 Mir543-201ENSMUST00000102286 76 ntBASIC-1.43□□□□□ -2.64
Trim55G3X8Y1 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.47□□□□□ -2.64
Trim55G3X8Y1 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.48□□□□□ -2.65
Trim55G3X8Y1 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.49□□□□□ -2.65
Trim55G3X8Y1 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.49□□□□□ -2.65
Trim55G3X8Y1 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.49□□□□□ -2.65
Trim55G3X8Y1 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.5□□□□□ -2.65
Trim55G3X8Y1 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.52□□□□□ -2.65
Trim55G3X8Y1 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.52□□□□□ -2.65
Trim55G3X8Y1 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.54□□□□□ -2.66
Trim55G3X8Y1 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.55□□□□□ -2.66
Trim55G3X8Y1 Mir1955-201ENSMUST00000158014 98 ntBASIC-1.61□□□□□ -2.67
Trim55G3X8Y1 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.62□□□□□ -2.67
Trim55G3X8Y1 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
Trim55G3X8Y1 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.64□□□□□ -2.67
Trim55G3X8Y1 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.67□□□□□ -2.68
Trim55G3X8Y1 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.67□□□□□ -2.68
Trim55G3X8Y1 Gm23961-201ENSMUST00000104685 97 ntBASIC-1.69□□□□□ -2.68
Trim55G3X8Y1 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.7□□□□□ -2.68
Trim55G3X8Y1 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-1.7□□□□□ -2.68
Trim55G3X8Y1 Mir192-201ENSMUST00000083589 89 ntBASIC-1.7□□□□□ -2.68
Trim55G3X8Y1 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.71□□□□□ -2.68
Trim55G3X8Y1 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.71□□□□□ -2.68
Trim55G3X8Y1 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.75□□□□□ -2.69
Trim55G3X8Y1 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.77□□□□□ -2.69
Trim55G3X8Y1 Gm22056-201ENSMUST00000083386 81 ntBASIC-1.77□□□□□ -2.69
Trim55G3X8Y1 Gm22127-201ENSMUST00000083239 106 ntBASIC-1.78□□□□□ -2.69
Trim55G3X8Y1 Gm24651-201ENSMUST00000157107 107 ntBASIC-1.79□□□□□ -2.7
Trim55G3X8Y1 Gm22260-201ENSMUST00000178643 107 ntBASIC-1.79□□□□□ -2.7
Trim55G3X8Y1 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.81□□□□□ -2.7
Trim55G3X8Y1 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.81□□□□□ -2.7
Trim55G3X8Y1 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Trim55G3X8Y1 Mir539-201ENSMUST00000102109 74 ntBASIC-1.83□□□□□ -2.7
Trim55G3X8Y1 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.83□□□□□ -2.7
Trim55G3X8Y1 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.86□□□□□ -2.71
Trim55G3X8Y1 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.89□□□□□ -2.71
Trim55G3X8Y1 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.9□□□□□ -2.71
Trim55G3X8Y1 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.96□□□□□ -2.72
Trim55G3X8Y1 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.96□□□□□ -2.72
Trim55G3X8Y1 Gm25143-201ENSMUST00000082696 109 ntBASIC-1.96□□□□□ -2.72
Trim55G3X8Y1 Mir122-201ENSMUST00000083468 66 ntBASIC-1.97□□□□□ -2.72
Trim55G3X8Y1 Gm23315-201ENSMUST00000158003 109 ntBASIC-1.98□□□□□ -2.73
Trim55G3X8Y1 Gm24502-201ENSMUST00000158453 105 ntBASIC-1.99□□□□□ -2.73
Trim55G3X8Y1 Gm44351-201ENSMUST00000200090 95 ntBASIC-2□□□□□ -2.73
Trim55G3X8Y1 Mir335-201ENSMUST00000083567 98 ntBASIC-2□□□□□ -2.73
Trim55G3X8Y1 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.01□□□□□ -2.73
Trim55G3X8Y1 Mir379-201ENSMUST00000083564 66 ntBASIC-2.01□□□□□ -2.73
Trim55G3X8Y1 Gm26259-201ENSMUST00000104778 97 ntBASIC-2.02□□□□□ -2.73
Trim55G3X8Y1 Gm23543-201ENSMUST00000158207 106 ntBASIC-2.03□□□□□ -2.73
Trim55G3X8Y1 Gm22232-201ENSMUST00000104654 94 ntBASIC-2.07□□□□□ -2.74
Trim55G3X8Y1 Gm22301-201ENSMUST00000082656 107 ntBASIC-2.07□□□□□ -2.74
Trim55G3X8Y1 Gm23556-201ENSMUST00000157821 92 ntBASIC-2.13□□□□□ -2.75
Trim55G3X8Y1 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.16□□□□□ -2.76
Trim55G3X8Y1 Mir351-201ENSMUST00000083569 99 ntBASIC-2.18□□□□□ -2.76
Trim55G3X8Y1 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.23□□□□□ -2.77
Trim55G3X8Y1 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.23□□□□□ -2.77
Trim55G3X8Y1 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.23□□□□□ -2.77
Trim55G3X8Y1 Gm26227-201ENSMUST00000082510 101 ntBASIC-2.23□□□□□ -2.77
Trim55G3X8Y1 Snord58b-201ENSMUST00000082937 66 ntBASIC-2.25□□□□□ -2.77
Trim55G3X8Y1 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.26□□□□□ -2.77
Trim55G3X8Y1 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.27□□□□□ -2.77
Trim55G3X8Y1 Gm22550-201ENSMUST00000179774 107 ntBASIC-2.28□□□□□ -2.77
Trim55G3X8Y1 Gm22060-201ENSMUST00000082558 107 ntBASIC-2.28□□□□□ -2.77
Trim55G3X8Y1 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.34□□□□□ -2.78
Trim55G3X8Y1 Gm22925-201ENSMUST00000174956 102 ntBASIC-2.34□□□□□ -2.78
Trim55G3X8Y1 Gm26306-201ENSMUST00000157773 119 ntBASIC-2.38□□□□□ -2.79
Trim55G3X8Y1 Gm25132-201ENSMUST00000082652 107 ntBASIC-2.4□□□□□ -2.79
Trim55G3X8Y1 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.42□□□□□ -2.8
Trim55G3X8Y1 Gm24016-201ENSMUST00000157726 68 ntBASIC-2.44□□□□□ -2.8
Trim55G3X8Y1 Mir664-201ENSMUST00000196796 69 ntBASIC-2.44□□□□□ -2.8
Trim55G3X8Y1 Gm23428-201ENSMUST00000122488 102 ntBASIC-2.46□□□□□ -2.8
Trim55G3X8Y1 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.47□□□□□ -2.8
Trim55G3X8Y1 Gm22296-201ENSMUST00000083310 103 ntBASIC-2.5□□□□□ -2.81
Trim55G3X8Y1 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.52□□□□□ -2.81
Trim55G3X8Y1 Mir470-201ENSMUST00000093565 75 ntBASIC-2.52□□□□□ -2.81
Trim55G3X8Y1 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.53□□□□□ -2.81
Trim55G3X8Y1 Gm24194-201ENSMUST00000116805 90 ntBASIC-2.53□□□□□ -2.81
Trim55G3X8Y1 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.59□□□□□ -2.82
Trim55G3X8Y1 Mir493-201ENSMUST00000103837 83 ntBASIC-2.61□□□□□ -2.83
Trim55G3X8Y1 Gm24387-201ENSMUST00000104625 90 ntBASIC-2.62□□□□□ -2.83
Trim55G3X8Y1 Gm24631-201ENSMUST00000122765 81 ntBASIC-2.62□□□□□ -2.83
Trim55G3X8Y1 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.62□□□□□ -2.83
Trim55G3X8Y1 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.65□□□□□ -2.83
Trim55G3X8Y1 AC160976.1-201ENSMUST00000215092 148 ntBASIC-2.67□□□□□ -2.84
Trim55G3X8Y1 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-2.71□□□□□ -2.84
Trim55G3X8Y1 Gm23066-201ENSMUST00000158237 71 ntBASIC-2.72□□□□□ -2.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms