Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.16□□□□□ -2.6
H2afb1S4R1E0 Gm27735-201ENSMUST00000185085 76 ntBASIC-1.17□□□□□ -2.6
H2afb1S4R1E0 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.18□□□□□ -2.6
H2afb1S4R1E0 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.18□□□□□ -2.6
H2afb1S4R1E0 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.18□□□□□ -2.6
H2afb1S4R1E0 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.2□□□□□ -2.6
H2afb1S4R1E0 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.2□□□□□ -2.6
H2afb1S4R1E0 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.2□□□□□ -2.6
H2afb1S4R1E0 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.21□□□□□ -2.6
H2afb1S4R1E0 Snord123-201ENSMUST00000158692 71 ntBASIC-1.23□□□□□ -2.61
H2afb1S4R1E0 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.23□□□□□ -2.61
H2afb1S4R1E0 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.23□□□□□ -2.61
H2afb1S4R1E0 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.24□□□□□ -2.61
H2afb1S4R1E0 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.24□□□□□ -2.61
H2afb1S4R1E0 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.25□□□□□ -2.61
H2afb1S4R1E0 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.25□□□□□ -2.61
H2afb1S4R1E0 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.25□□□□□ -2.61
H2afb1S4R1E0 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.26□□□□□ -2.61
H2afb1S4R1E0 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.27□□□□□ -2.61
H2afb1S4R1E0 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.27□□□□□ -2.61
H2afb1S4R1E0 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.27□□□□□ -2.61
H2afb1S4R1E0 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.29□□□□□ -2.62
H2afb1S4R1E0 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.29□□□□□ -2.62
H2afb1S4R1E0 Gm22033-201ENSMUST00000116947 90 ntBASIC-1.3□□□□□ -2.62
H2afb1S4R1E0 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.3□□□□□ -2.62
H2afb1S4R1E0 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.3□□□□□ -2.62
H2afb1S4R1E0 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.31□□□□□ -2.62
H2afb1S4R1E0 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.31□□□□□ -2.62
H2afb1S4R1E0 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.33□□□□□ -2.62
H2afb1S4R1E0 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.34□□□□□ -2.62
H2afb1S4R1E0 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.34□□□□□ -2.62
H2afb1S4R1E0 Mir543-201ENSMUST00000102286 76 ntBASIC-1.35□□□□□ -2.63
H2afb1S4R1E0 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.35□□□□□ -2.63
H2afb1S4R1E0 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.35□□□□□ -2.63
H2afb1S4R1E0 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.36□□□□□ -2.63
H2afb1S4R1E0 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.38□□□□□ -2.63
H2afb1S4R1E0 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.38□□□□□ -2.63
H2afb1S4R1E0 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.39□□□□□ -2.63
H2afb1S4R1E0 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.39□□□□□ -2.63
H2afb1S4R1E0 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.39□□□□□ -2.63
H2afb1S4R1E0 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.4□□□□□ -2.63
H2afb1S4R1E0 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.41□□□□□ -2.64
H2afb1S4R1E0 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.41□□□□□ -2.64
H2afb1S4R1E0 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.41□□□□□ -2.64
H2afb1S4R1E0 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.43□□□□□ -2.64
H2afb1S4R1E0 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.44□□□□□ -2.64
H2afb1S4R1E0 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.44□□□□□ -2.64
H2afb1S4R1E0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
H2afb1S4R1E0 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.44□□□□□ -2.64
H2afb1S4R1E0 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.45□□□□□ -2.64
H2afb1S4R1E0 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.46□□□□□ -2.64
H2afb1S4R1E0 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.46□□□□□ -2.64
H2afb1S4R1E0 Mir367-201ENSMUST00000083479 75 ntBASIC-1.46□□□□□ -2.64
H2afb1S4R1E0 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.48□□□□□ -2.65
H2afb1S4R1E0 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.48□□□□□ -2.65
H2afb1S4R1E0 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.49□□□□□ -2.65
H2afb1S4R1E0 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.49□□□□□ -2.65
H2afb1S4R1E0 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.5□□□□□ -2.65
H2afb1S4R1E0 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.5□□□□□ -2.65
H2afb1S4R1E0 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.51□□□□□ -2.65
H2afb1S4R1E0 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.51□□□□□ -2.65
H2afb1S4R1E0 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.51□□□□□ -2.65
H2afb1S4R1E0 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.52□□□□□ -2.65
H2afb1S4R1E0 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.52□□□□□ -2.65
H2afb1S4R1E0 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.53□□□□□ -2.65
H2afb1S4R1E0 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.54□□□□□ -2.66
H2afb1S4R1E0 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.54□□□□□ -2.66
H2afb1S4R1E0 Mir295-201ENSMUST00000104694 69 ntBASIC-1.55□□□□□ -2.66
H2afb1S4R1E0 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.56□□□□□ -2.66
H2afb1S4R1E0 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.56□□□□□ -2.66
H2afb1S4R1E0 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.56□□□□□ -2.66
H2afb1S4R1E0 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.57□□□□□ -2.66
H2afb1S4R1E0 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.57□□□□□ -2.66
H2afb1S4R1E0 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.57□□□□□ -2.66
H2afb1S4R1E0 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.57□□□□□ -2.66
H2afb1S4R1E0 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.58□□□□□ -2.66
H2afb1S4R1E0 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-1.59□□□□□ -2.66
H2afb1S4R1E0 Mir574-201ENSMUST00000103854 78 ntBASIC-1.59□□□□□ -2.66
H2afb1S4R1E0 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.59□□□□□ -2.66
H2afb1S4R1E0 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.59□□□□□ -2.66
H2afb1S4R1E0 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.6□□□□□ -2.67
H2afb1S4R1E0 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.6□□□□□ -2.67
H2afb1S4R1E0 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.6□□□□□ -2.67
H2afb1S4R1E0 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.61□□□□□ -2.67
H2afb1S4R1E0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
H2afb1S4R1E0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
H2afb1S4R1E0 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.63□□□□□ -2.67
H2afb1S4R1E0 Mir192-201ENSMUST00000083589 89 ntBASIC-1.65□□□□□ -2.67
H2afb1S4R1E0 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.66□□□□□ -2.68
H2afb1S4R1E0 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.67□□□□□ -2.68
H2afb1S4R1E0 Gm25222-201ENSMUST00000158199 126 ntBASIC-1.68□□□□□ -2.68
H2afb1S4R1E0 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.68□□□□□ -2.68
H2afb1S4R1E0 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.69□□□□□ -2.68
H2afb1S4R1E0 Gm24396-201ENSMUST00000116905 93 ntBASIC-1.7□□□□□ -2.68
H2afb1S4R1E0 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.7□□□□□ -2.68
H2afb1S4R1E0 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 76,532 protein–RNA pairs in 167.1 ms