Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.73□□□□□ -2.69
Cpsf3Q9QXK7 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.74□□□□□ -2.69
Cpsf3Q9QXK7 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.74□□□□□ -2.69
Cpsf3Q9QXK7 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.75□□□□□ -2.69
Cpsf3Q9QXK7 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.75□□□□□ -2.69
Cpsf3Q9QXK7 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.76□□□□□ -2.69
Cpsf3Q9QXK7 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.76□□□□□ -2.69
Cpsf3Q9QXK7 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.76□□□□□ -2.69
Cpsf3Q9QXK7 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.77□□□□□ -2.69
Cpsf3Q9QXK7 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.78□□□□□ -2.69
Cpsf3Q9QXK7 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.78□□□□□ -2.69
Cpsf3Q9QXK7 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.78□□□□□ -2.69
Cpsf3Q9QXK7 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.78□□□□□ -2.69
Cpsf3Q9QXK7 Snord123-201ENSMUST00000158692 71 ntBASIC-1.79□□□□□ -2.7
Cpsf3Q9QXK7 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.79□□□□□ -2.7
Cpsf3Q9QXK7 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.79□□□□□ -2.7
Cpsf3Q9QXK7 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.8□□□□□ -2.7
Cpsf3Q9QXK7 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.8□□□□□ -2.7
Cpsf3Q9QXK7 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.81□□□□□ -2.7
Cpsf3Q9QXK7 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.81□□□□□ -2.7
Cpsf3Q9QXK7 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.81□□□□□ -2.7
Cpsf3Q9QXK7 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.82□□□□□ -2.7
Cpsf3Q9QXK7 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.83□□□□□ -2.7
Cpsf3Q9QXK7 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.83□□□□□ -2.7
Cpsf3Q9QXK7 Mir543-201ENSMUST00000102286 76 ntBASIC-1.84□□□□□ -2.7
Cpsf3Q9QXK7 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.85□□□□□ -2.71
Cpsf3Q9QXK7 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.85□□□□□ -2.71
Cpsf3Q9QXK7 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.86□□□□□ -2.71
Cpsf3Q9QXK7 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.9□□□□□ -2.71
Cpsf3Q9QXK7 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.9□□□□□ -2.71
Cpsf3Q9QXK7 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.91□□□□□ -2.72
Cpsf3Q9QXK7 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.92□□□□□ -2.72
Cpsf3Q9QXK7 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.93□□□□□ -2.72
Cpsf3Q9QXK7 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.94□□□□□ -2.72
Cpsf3Q9QXK7 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.95□□□□□ -2.72
Cpsf3Q9QXK7 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.95□□□□□ -2.72
Cpsf3Q9QXK7 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.95□□□□□ -2.72
Cpsf3Q9QXK7 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.95□□□□□ -2.72
Cpsf3Q9QXK7 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.96□□□□□ -2.72
Cpsf3Q9QXK7 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.97□□□□□ -2.72
Cpsf3Q9QXK7 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.98□□□□□ -2.73
Cpsf3Q9QXK7 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.99□□□□□ -2.73
Cpsf3Q9QXK7 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.99□□□□□ -2.73
Cpsf3Q9QXK7 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.99□□□□□ -2.73
Cpsf3Q9QXK7 Gm23316-201ENSMUST00000157997 114 ntBASIC-2□□□□□ -2.73
Cpsf3Q9QXK7 Gm25903-201ENSMUST00000158492 103 ntBASIC-2□□□□□ -2.73
Cpsf3Q9QXK7 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2□□□□□ -2.73
Cpsf3Q9QXK7 Mir367-201ENSMUST00000083479 75 ntBASIC-2□□□□□ -2.73
Cpsf3Q9QXK7 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.01□□□□□ -2.73
Cpsf3Q9QXK7 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.01□□□□□ -2.73
Cpsf3Q9QXK7 Gm24996-201ENSMUST00000158390 99 ntBASIC-2.01□□□□□ -2.73
Cpsf3Q9QXK7 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.02□□□□□ -2.73
Cpsf3Q9QXK7 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.03□□□□□ -2.73
Cpsf3Q9QXK7 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.04□□□□□ -2.74
Cpsf3Q9QXK7 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.04□□□□□ -2.74
Cpsf3Q9QXK7 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.06□□□□□ -2.74
Cpsf3Q9QXK7 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.07□□□□□ -2.74
Cpsf3Q9QXK7 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.08□□□□□ -2.74
Cpsf3Q9QXK7 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.08□□□□□ -2.74
Cpsf3Q9QXK7 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.08□□□□□ -2.74
Cpsf3Q9QXK7 Gm24927-201ENSMUST00000083397 107 ntBASIC-2.09□□□□□ -2.74
Cpsf3Q9QXK7 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.1□□□□□ -2.75
Cpsf3Q9QXK7 Gm24725-201ENSMUST00000158229 125 ntBASIC-2.1□□□□□ -2.75
Cpsf3Q9QXK7 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.1□□□□□ -2.75
Cpsf3Q9QXK7 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.12□□□□□ -2.75
Cpsf3Q9QXK7 Gm27935-201ENSMUST00000183894 79 ntBASIC-2.12□□□□□ -2.75
Cpsf3Q9QXK7 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.12□□□□□ -2.75
Cpsf3Q9QXK7 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.13□□□□□ -2.75
Cpsf3Q9QXK7 Gm24226-201ENSMUST00000158826 97 ntBASIC-2.14□□□□□ -2.75
Cpsf3Q9QXK7 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.14□□□□□ -2.75
Cpsf3Q9QXK7 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.14□□□□□ -2.75
Cpsf3Q9QXK7 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-2.17□□□□□ -2.76
Cpsf3Q9QXK7 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.17□□□□□ -2.76
Cpsf3Q9QXK7 Gm44347-201ENSMUST00000199602 108 ntBASIC-2.17□□□□□ -2.76
Cpsf3Q9QXK7 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-2.19□□□□□ -2.76
Cpsf3Q9QXK7 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.2□□□□□ -2.76
Cpsf3Q9QXK7 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.2□□□□□ -2.76
Cpsf3Q9QXK7 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.21□□□□□ -2.76
Cpsf3Q9QXK7 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.22□□□□□ -2.76
Cpsf3Q9QXK7 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.23□□□□□ -2.77
Cpsf3Q9QXK7 Mir466l-201ENSMUST00000104866 121 ntBASIC-2.26□□□□□ -2.77
Cpsf3Q9QXK7 Mir295-201ENSMUST00000104694 69 ntBASIC-2.27□□□□□ -2.77
Cpsf3Q9QXK7 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.28□□□□□ -2.77
Cpsf3Q9QXK7 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.28□□□□□ -2.77
Cpsf3Q9QXK7 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.29□□□□□ -2.78
Cpsf3Q9QXK7 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.29□□□□□ -2.78
Cpsf3Q9QXK7 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.3□□□□□ -2.78
Cpsf3Q9QXK7 Mir192-201ENSMUST00000083589 89 ntBASIC-2.3□□□□□ -2.78
Cpsf3Q9QXK7 Gm22039-201ENSMUST00000157278 132 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 76,532 protein–RNA pairs in 850.6 ms