Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.98□□□□□ -2.73
Scn4aQ9ER60 Gm24605-201ENSMUST00000104772 96 ntBASIC-1.98□□□□□ -2.73
Scn4aQ9ER60 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.98□□□□□ -2.73
Scn4aQ9ER60 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.99□□□□□ -2.73
Scn4aQ9ER60 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.99□□□□□ -2.73
Scn4aQ9ER60 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.99□□□□□ -2.73
Scn4aQ9ER60 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.01□□□□□ -2.73
Scn4aQ9ER60 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
Scn4aQ9ER60 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.01□□□□□ -2.73
Scn4aQ9ER60 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.02□□□□□ -2.73
Scn4aQ9ER60 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
Scn4aQ9ER60 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.02□□□□□ -2.73
Scn4aQ9ER60 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 AC238676.2-201ENSMUST00000220910 94 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 Gm25087-201ENSMUST00000101992 78 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 Mir450b-201ENSMUST00000102095 82 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 Gm22354-201ENSMUST00000083919 70 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 Gm26467-201ENSMUST00000097257 78 ntBASIC-2.03□□□□□ -2.73
Scn4aQ9ER60 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.05□□□□□ -2.74
Scn4aQ9ER60 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.05□□□□□ -2.74
Scn4aQ9ER60 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.06□□□□□ -2.74
Scn4aQ9ER60 Mir379-201ENSMUST00000083564 66 ntBASIC-2.06□□□□□ -2.74
Scn4aQ9ER60 Gm25648-201ENSMUST00000177844 79 ntBASIC-2.08□□□□□ -2.74
Scn4aQ9ER60 Gm22717-201ENSMUST00000122703 171 ntBASIC-2.09□□□□□ -2.74
Scn4aQ9ER60 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.09□□□□□ -2.74
Scn4aQ9ER60 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.1□□□□□ -2.74
Scn4aQ9ER60 Gm22965-201ENSMUST00000157958 101 ntBASIC-2.1□□□□□ -2.74
Scn4aQ9ER60 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.1□□□□□ -2.74
Scn4aQ9ER60 Gm43206-201ENSMUST00000197990 114 ntBASIC-2.1□□□□□ -2.74
Scn4aQ9ER60 Gm24806-201ENSMUST00000117036 90 ntBASIC-2.11□□□□□ -2.75
Scn4aQ9ER60 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.11□□□□□ -2.75
Scn4aQ9ER60 Mir367-201ENSMUST00000083479 75 ntBASIC-2.12□□□□□ -2.75
Scn4aQ9ER60 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.13□□□□□ -2.75
Scn4aQ9ER60 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.13□□□□□ -2.75
Scn4aQ9ER60 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.13□□□□□ -2.75
Scn4aQ9ER60 Gm24410-201ENSMUST00000083433 107 ntBASIC-2.13□□□□□ -2.75
Scn4aQ9ER60 AC161271.1-201ENSMUST00000226914 150 ntBASIC-2.14□□□□□ -2.75
Scn4aQ9ER60 Gm22746-201ENSMUST00000082494 107 ntBASIC-2.14□□□□□ -2.75
Scn4aQ9ER60 Gm24482-201ENSMUST00000117005 93 ntBASIC-2.15□□□□□ -2.75
Scn4aQ9ER60 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.16□□□□□ -2.76
Scn4aQ9ER60 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.16□□□□□ -2.76
Scn4aQ9ER60 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.16□□□□□ -2.76
Scn4aQ9ER60 Gm26257-201ENSMUST00000122500 107 ntBASIC-2.17□□□□□ -2.76
Scn4aQ9ER60 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.17□□□□□ -2.76
Scn4aQ9ER60 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.17□□□□□ -2.76
Scn4aQ9ER60 Gm23653-201ENSMUST00000116751 97 ntBASIC-2.19□□□□□ -2.76
Scn4aQ9ER60 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.19□□□□□ -2.76
Scn4aQ9ER60 Gm24996-201ENSMUST00000158390 99 ntBASIC-2.24□□□□□ -2.77
Scn4aQ9ER60 Gm24495-201ENSMUST00000178575 79 ntBASIC-2.24□□□□□ -2.77
Scn4aQ9ER60 Gm22253-201ENSMUST00000179870 79 ntBASIC-2.24□□□□□ -2.77
Scn4aQ9ER60 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.25□□□□□ -2.77
Scn4aQ9ER60 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.25□□□□□ -2.77
Scn4aQ9ER60 Gm24331-201ENSMUST00000175099 67 ntBASIC-2.25□□□□□ -2.77
Scn4aQ9ER60 Gm23801-201ENSMUST00000175561 67 ntBASIC-2.25□□□□□ -2.77
Scn4aQ9ER60 Gm24485-201ENSMUST00000178283 67 ntBASIC-2.25□□□□□ -2.77
Scn4aQ9ER60 Gm25022-201ENSMUST00000102205 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm25326-201ENSMUST00000101903 107 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm23573-201ENSMUST00000104408 107 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm22357-201ENSMUST00000082882 83 ntBASIC-2.26□□□□□ -2.77
Scn4aQ9ER60 Gm22845-201ENSMUST00000157712 104 ntBASIC-2.27□□□□□ -2.77
Scn4aQ9ER60 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.27□□□□□ -2.77
Scn4aQ9ER60 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.28□□□□□ -2.77
Scn4aQ9ER60 Snord50a-201ENSMUST00000178154 72 ntBASIC-2.28□□□□□ -2.77
Scn4aQ9ER60 Gm24463-201ENSMUST00000178417 72 ntBASIC-2.28□□□□□ -2.77
Scn4aQ9ER60 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.28□□□□□ -2.78
Scn4aQ9ER60 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.29□□□□□ -2.78
Scn4aQ9ER60 Gm24378-201ENSMUST00000122699 106 ntBASIC-2.3□□□□□ -2.78
Scn4aQ9ER60 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.3□□□□□ -2.78
Scn4aQ9ER60 Gm23376-201ENSMUST00000082938 160 ntBASIC-2.3□□□□□ -2.78
Scn4aQ9ER60 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.31□□□□□ -2.78
Scn4aQ9ER60 Mir539-201ENSMUST00000102109 74 ntBASIC-2.31□□□□□ -2.78
Scn4aQ9ER60 Gm24259-201ENSMUST00000083740 107 ntBASIC-2.31□□□□□ -2.78
Scn4aQ9ER60 Gm24586-201ENSMUST00000116695 89 ntBASIC-2.32□□□□□ -2.78
Scn4aQ9ER60 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.32□□□□□ -2.78
Scn4aQ9ER60 Gm23038-201ENSMUST00000083873 104 ntBASIC-2.32□□□□□ -2.78
Scn4aQ9ER60 Gm23856-201ENSMUST00000158380 99 ntBASIC-2.33□□□□□ -2.78
Scn4aQ9ER60 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.33□□□□□ -2.78
Scn4aQ9ER60 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.33□□□□□ -2.78
Scn4aQ9ER60 Mir192-201ENSMUST00000083589 89 ntBASIC-2.33□□□□□ -2.78
Scn4aQ9ER60 Mir470-201ENSMUST00000093565 75 ntBASIC-2.33□□□□□ -2.78
Scn4aQ9ER60 Gm22573-201ENSMUST00000082982 102 ntBASIC-2.34□□□□□ -2.78
Scn4aQ9ER60 Mir485-201ENSMUST00000093620 73 ntBASIC-2.35□□□□□ -2.79
Scn4aQ9ER60 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.36□□□□□ -2.79
Scn4aQ9ER60 Gm23730-201ENSMUST00000083236 107 ntBASIC-2.36□□□□□ -2.79
Scn4aQ9ER60 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.37□□□□□ -2.79
Scn4aQ9ER60 Gm20305-201ENSMUST00000193226 177 ntBASIC-2.38□□□□□ -2.79
Scn4aQ9ER60 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.38□□□□□ -2.79
Scn4aQ9ER60 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.39□□□□□ -2.79
Scn4aQ9ER60 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 174.8 ms