Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.53□□□□□ -2.49
Upf1Q9EPU0 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.53□□□□□ -2.49
Upf1Q9EPU0 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.53□□□□□ -2.49
Upf1Q9EPU0 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.53□□□□□ -2.49
Upf1Q9EPU0 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.54□□□□□ -2.5
Upf1Q9EPU0 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.54□□□□□ -2.5
Upf1Q9EPU0 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.54□□□□□ -2.5
Upf1Q9EPU0 Mir702-201ENSMUST00000102285 109 ntBASIC-0.55□□□□□ -2.5
Upf1Q9EPU0 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.55□□□□□ -2.5
Upf1Q9EPU0 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.55□□□□□ -2.5
Upf1Q9EPU0 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.56□□□□□ -2.5
Upf1Q9EPU0 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.56□□□□□ -2.5
Upf1Q9EPU0 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.58□□□□□ -2.5
Upf1Q9EPU0 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
Upf1Q9EPU0 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.58□□□□□ -2.5
Upf1Q9EPU0 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.58□□□□□ -2.5
Upf1Q9EPU0 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.59□□□□□ -2.5
Upf1Q9EPU0 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.59□□□□□ -2.5
Upf1Q9EPU0 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.6□□□□□ -2.51
Upf1Q9EPU0 Gm22039-201ENSMUST00000157278 132 ntBASIC-0.6□□□□□ -2.51
Upf1Q9EPU0 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.6□□□□□ -2.51
Upf1Q9EPU0 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.61□□□□□ -2.51
Upf1Q9EPU0 Mir136-201ENSMUST00000199494 62 ntBASIC-0.61□□□□□ -2.51
Upf1Q9EPU0 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.61□□□□□ -2.51
Upf1Q9EPU0 Mir96-201ENSMUST00000083652 106 ntBASIC-0.63□□□□□ -2.51
Upf1Q9EPU0 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.64□□□□□ -2.51
Upf1Q9EPU0 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.65□□□□□ -2.51
Upf1Q9EPU0 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.67□□□□□ -2.52
Upf1Q9EPU0 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.67□□□□□ -2.52
Upf1Q9EPU0 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.67□□□□□ -2.52
Upf1Q9EPU0 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.67□□□□□ -2.52
Upf1Q9EPU0 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.68□□□□□ -2.52
Upf1Q9EPU0 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.68□□□□□ -2.52
Upf1Q9EPU0 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.69□□□□□ -2.52
Upf1Q9EPU0 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.69□□□□□ -2.52
Upf1Q9EPU0 Gm22938-201ENSMUST00000103956 120 ntBASIC-0.7□□□□□ -2.52
Upf1Q9EPU0 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.7□□□□□ -2.52
Upf1Q9EPU0 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.72□□□□□ -2.52
Upf1Q9EPU0 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.72□□□□□ -2.52
Upf1Q9EPU0 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.72□□□□□ -2.52
Upf1Q9EPU0 Gm25950-201ENSMUST00000175331 100 ntBASIC-0.73□□□□□ -2.53
Upf1Q9EPU0 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.74□□□□□ -2.53
Upf1Q9EPU0 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.75□□□□□ -2.53
Upf1Q9EPU0 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.76□□□□□ -2.53
Upf1Q9EPU0 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.78□□□□□ -2.53
Upf1Q9EPU0 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.78□□□□□ -2.53
Upf1Q9EPU0 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.79□□□□□ -2.54
Upf1Q9EPU0 Gm25601-201ENSMUST00000158356 105 ntBASIC-0.8□□□□□ -2.54
Upf1Q9EPU0 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.8□□□□□ -2.54
Upf1Q9EPU0 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.82□□□□□ -2.54
Upf1Q9EPU0 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.83□□□□□ -2.54
Upf1Q9EPU0 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.84□□□□□ -2.54
Upf1Q9EPU0 n-R5s155-201ENSMUST00000122531 113 ntBASIC-0.84□□□□□ -2.54
Upf1Q9EPU0 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.84□□□□□ -2.54
Upf1Q9EPU0 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.86□□□□□ -2.55
Upf1Q9EPU0 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.86□□□□□ -2.55
Upf1Q9EPU0 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.86□□□□□ -2.55
Upf1Q9EPU0 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.87□□□□□ -2.55
Upf1Q9EPU0 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.87□□□□□ -2.55
Upf1Q9EPU0 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.88□□□□□ -2.55
Upf1Q9EPU0 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.88□□□□□ -2.55
Upf1Q9EPU0 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.88□□□□□ -2.55
Upf1Q9EPU0 Mir677-202ENSMUST00000197076 78 ntBASIC-0.91□□□□□ -2.56
Upf1Q9EPU0 Mir7015-201ENSMUST00000199525 64 ntBASIC-0.91□□□□□ -2.56
Upf1Q9EPU0 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.92□□□□□ -2.56
Upf1Q9EPU0 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.93□□□□□ -2.56
Upf1Q9EPU0 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.93□□□□□ -2.56
Upf1Q9EPU0 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.93□□□□□ -2.56
Upf1Q9EPU0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
Upf1Q9EPU0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
Upf1Q9EPU0 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.94□□□□□ -2.56
Upf1Q9EPU0 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.96□□□□□ -2.56
Upf1Q9EPU0 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.97□□□□□ -2.56
Upf1Q9EPU0 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.98□□□□□ -2.57
Upf1Q9EPU0 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.98□□□□□ -2.57
Upf1Q9EPU0 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.98□□□□□ -2.57
Upf1Q9EPU0 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.98□□□□□ -2.57
Upf1Q9EPU0 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.99□□□□□ -2.57
Upf1Q9EPU0 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.99□□□□□ -2.57
Upf1Q9EPU0 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.01□□□□□ -2.57
Upf1Q9EPU0 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.02□□□□□ -2.57
Upf1Q9EPU0 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.02□□□□□ -2.57
Upf1Q9EPU0 Gm25524-201ENSMUST00000101821 107 ntBASIC-1.04□□□□□ -2.58
Upf1Q9EPU0 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.04□□□□□ -2.58
Upf1Q9EPU0 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.08□□□□□ -2.58
Upf1Q9EPU0 Gm24710-201ENSMUST00000175235 101 ntBASIC-1.09□□□□□ -2.58
Upf1Q9EPU0 Gm24135-201ENSMUST00000179085 101 ntBASIC-1.09□□□□□ -2.58
Upf1Q9EPU0 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.09□□□□□ -2.58
Upf1Q9EPU0 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.11□□□□□ -2.59
Upf1Q9EPU0 Gm22879-201ENSMUST00000082895 74 ntBASIC-1.11□□□□□ -2.59
Upf1Q9EPU0 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.12□□□□□ -2.59
Upf1Q9EPU0 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.12□□□□□ -2.59
Upf1Q9EPU0 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.12□□□□□ -2.59
Upf1Q9EPU0 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.12□□□□□ -2.59
Upf1Q9EPU0 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.13□□□□□ -2.59
Upf1Q9EPU0 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.14□□□□□ -2.59
Upf1Q9EPU0 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.15□□□□□ -2.59
Upf1Q9EPU0 Gm22474-201ENSMUST00000179407 107 ntBASIC-1.18□□□□□ -2.6
Upf1Q9EPU0 Mir335-201ENSMUST00000083567 98 ntBASIC-1.19□□□□□ -2.6
Upf1Q9EPU0 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms