Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.25□□□□□ -2.61
Sf3b1Q99NB9 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.26□□□□□ -2.61
Sf3b1Q99NB9 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.27□□□□□ -2.61
Sf3b1Q99NB9 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.27□□□□□ -2.61
Sf3b1Q99NB9 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.27□□□□□ -2.61
Sf3b1Q99NB9 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.27□□□□□ -2.61
Sf3b1Q99NB9 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.27□□□□□ -2.61
Sf3b1Q99NB9 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.28□□□□□ -2.61
Sf3b1Q99NB9 Gm44385-201ENSMUST00000198781 81 ntBASIC-1.28□□□□□ -2.61
Sf3b1Q99NB9 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.29□□□□□ -2.62
Sf3b1Q99NB9 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.3□□□□□ -2.62
Sf3b1Q99NB9 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.3□□□□□ -2.62
Sf3b1Q99NB9 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.3□□□□□ -2.62
Sf3b1Q99NB9 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.31□□□□□ -2.62
Sf3b1Q99NB9 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.31□□□□□ -2.62
Sf3b1Q99NB9 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.31□□□□□ -2.62
Sf3b1Q99NB9 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.32□□□□□ -2.62
Sf3b1Q99NB9 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Mir367-201ENSMUST00000083479 75 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.33□□□□□ -2.62
Sf3b1Q99NB9 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.34□□□□□ -2.62
Sf3b1Q99NB9 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.34□□□□□ -2.62
Sf3b1Q99NB9 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.34□□□□□ -2.62
Sf3b1Q99NB9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Sf3b1Q99NB9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Sf3b1Q99NB9 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.36□□□□□ -2.63
Sf3b1Q99NB9 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.37□□□□□ -2.63
Sf3b1Q99NB9 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.37□□□□□ -2.63
Sf3b1Q99NB9 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.37□□□□□ -2.63
Sf3b1Q99NB9 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.38□□□□□ -2.63
Sf3b1Q99NB9 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.38□□□□□ -2.63
Sf3b1Q99NB9 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.39□□□□□ -2.63
Sf3b1Q99NB9 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.39□□□□□ -2.63
Sf3b1Q99NB9 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.4□□□□□ -2.63
Sf3b1Q99NB9 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.4□□□□□ -2.63
Sf3b1Q99NB9 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.41□□□□□ -2.64
Sf3b1Q99NB9 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.42□□□□□ -2.64
Sf3b1Q99NB9 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.43□□□□□ -2.64
Sf3b1Q99NB9 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.44□□□□□ -2.64
Sf3b1Q99NB9 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.45□□□□□ -2.64
Sf3b1Q99NB9 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.45□□□□□ -2.64
Sf3b1Q99NB9 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.45□□□□□ -2.64
Sf3b1Q99NB9 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.45□□□□□ -2.64
Sf3b1Q99NB9 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.45□□□□□ -2.64
Sf3b1Q99NB9 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.46□□□□□ -2.64
Sf3b1Q99NB9 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.46□□□□□ -2.64
Sf3b1Q99NB9 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.46□□□□□ -2.64
Sf3b1Q99NB9 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.46□□□□□ -2.64
Sf3b1Q99NB9 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.46□□□□□ -2.64
Sf3b1Q99NB9 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm44481-201ENSMUST00000197288 84 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm44339-201ENSMUST00000200598 84 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.47□□□□□ -2.65
Sf3b1Q99NB9 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.48□□□□□ -2.65
Sf3b1Q99NB9 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.48□□□□□ -2.65
Sf3b1Q99NB9 Mir122-201ENSMUST00000083468 66 ntBASIC-1.48□□□□□ -2.65
Sf3b1Q99NB9 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.49□□□□□ -2.65
Sf3b1Q99NB9 Mir192-201ENSMUST00000083589 89 ntBASIC-1.49□□□□□ -2.65
Sf3b1Q99NB9 Mir295-201ENSMUST00000104694 69 ntBASIC-1.5□□□□□ -2.65
Sf3b1Q99NB9 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.5□□□□□ -2.65
Sf3b1Q99NB9 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.51□□□□□ -2.65
Sf3b1Q99NB9 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.51□□□□□ -2.65
Sf3b1Q99NB9 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.51□□□□□ -2.65
Sf3b1Q99NB9 Mir539-201ENSMUST00000102109 74 ntBASIC-1.54□□□□□ -2.66
Sf3b1Q99NB9 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.54□□□□□ -2.66
Sf3b1Q99NB9 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.54□□□□□ -2.66
Sf3b1Q99NB9 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
Sf3b1Q99NB9 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.56□□□□□ -2.66
Sf3b1Q99NB9 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 437.7 ms