Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.98□□□□□ -2.57
Vsx1Q91V10 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.98□□□□□ -2.57
Vsx1Q91V10 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.98□□□□□ -2.57
Vsx1Q91V10 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.98□□□□□ -2.57
Vsx1Q91V10 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.98□□□□□ -2.57
Vsx1Q91V10 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.99□□□□□ -2.57
Vsx1Q91V10 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.99□□□□□ -2.57
Vsx1Q91V10 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.99□□□□□ -2.57
Vsx1Q91V10 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.99□□□□□ -2.57
Vsx1Q91V10 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1□□□□□ -2.57
Vsx1Q91V10 Gm24108-201ENSMUST00000175495 77 ntBASIC-1□□□□□ -2.57
Vsx1Q91V10 Gm26131-201ENSMUST00000082725 110 ntBASIC-1□□□□□ -2.57
Vsx1Q91V10 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.01□□□□□ -2.57
Vsx1Q91V10 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.01□□□□□ -2.57
Vsx1Q91V10 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.01□□□□□ -2.57
Vsx1Q91V10 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.01□□□□□ -2.57
Vsx1Q91V10 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.01□□□□□ -2.57
Vsx1Q91V10 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.02□□□□□ -2.57
Vsx1Q91V10 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.03□□□□□ -2.57
Vsx1Q91V10 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.03□□□□□ -2.57
Vsx1Q91V10 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.03□□□□□ -2.57
Vsx1Q91V10 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.03□□□□□ -2.57
Vsx1Q91V10 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.04□□□□□ -2.58
Vsx1Q91V10 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.04□□□□□ -2.58
Vsx1Q91V10 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.04□□□□□ -2.58
Vsx1Q91V10 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.05□□□□□ -2.58
Vsx1Q91V10 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.06□□□□□ -2.58
Vsx1Q91V10 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.08□□□□□ -2.58
Vsx1Q91V10 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.09□□□□□ -2.58
Vsx1Q91V10 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.09□□□□□ -2.58
Vsx1Q91V10 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.1□□□□□ -2.59
Vsx1Q91V10 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.1□□□□□ -2.59
Vsx1Q91V10 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.1□□□□□ -2.59
Vsx1Q91V10 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.11□□□□□ -2.59
Vsx1Q91V10 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.11□□□□□ -2.59
Vsx1Q91V10 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.11□□□□□ -2.59
Vsx1Q91V10 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.11□□□□□ -2.59
Vsx1Q91V10 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.13□□□□□ -2.59
Vsx1Q91V10 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
Vsx1Q91V10 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.14□□□□□ -2.59
Vsx1Q91V10 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.14□□□□□ -2.59
Vsx1Q91V10 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.15□□□□□ -2.59
Vsx1Q91V10 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.15□□□□□ -2.59
Vsx1Q91V10 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.16□□□□□ -2.6
Vsx1Q91V10 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.16□□□□□ -2.6
Vsx1Q91V10 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.17□□□□□ -2.6
Vsx1Q91V10 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.17□□□□□ -2.6
Vsx1Q91V10 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.17□□□□□ -2.6
Vsx1Q91V10 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.17□□□□□ -2.6
Vsx1Q91V10 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.18□□□□□ -2.6
Vsx1Q91V10 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.19□□□□□ -2.6
Vsx1Q91V10 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.19□□□□□ -2.6
Vsx1Q91V10 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.2□□□□□ -2.6
Vsx1Q91V10 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.2□□□□□ -2.6
Vsx1Q91V10 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.2□□□□□ -2.6
Vsx1Q91V10 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.2□□□□□ -2.6
Vsx1Q91V10 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.2□□□□□ -2.6
Vsx1Q91V10 Gm22033-201ENSMUST00000116947 90 ntBASIC-1.21□□□□□ -2.6
Vsx1Q91V10 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.21□□□□□ -2.6
Vsx1Q91V10 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.23□□□□□ -2.61
Vsx1Q91V10 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.24□□□□□ -2.61
Vsx1Q91V10 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
Vsx1Q91V10 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.25□□□□□ -2.61
Vsx1Q91V10 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.27□□□□□ -2.61
Vsx1Q91V10 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.28□□□□□ -2.61
Vsx1Q91V10 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.28□□□□□ -2.61
Vsx1Q91V10 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.29□□□□□ -2.62
Vsx1Q91V10 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.29□□□□□ -2.62
Vsx1Q91V10 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.29□□□□□ -2.62
Vsx1Q91V10 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.31□□□□□ -2.62
Vsx1Q91V10 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.31□□□□□ -2.62
Vsx1Q91V10 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.31□□□□□ -2.62
Vsx1Q91V10 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.32□□□□□ -2.62
Vsx1Q91V10 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.33□□□□□ -2.62
Vsx1Q91V10 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.33□□□□□ -2.62
Vsx1Q91V10 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.33□□□□□ -2.62
Vsx1Q91V10 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Snord123-201ENSMUST00000158692 71 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.36□□□□□ -2.63
Vsx1Q91V10 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.37□□□□□ -2.63
Vsx1Q91V10 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
Vsx1Q91V10 Mir543-201ENSMUST00000102286 76 ntBASIC-1.42□□□□□ -2.64
Vsx1Q91V10 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.42□□□□□ -2.64
Vsx1Q91V10 Mir367-201ENSMUST00000083479 75 ntBASIC-1.43□□□□□ -2.64
Vsx1Q91V10 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.45□□□□□ -2.64
Vsx1Q91V10 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.45□□□□□ -2.64
Vsx1Q91V10 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.46□□□□□ -2.64
Vsx1Q91V10 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.46□□□□□ -2.64
Vsx1Q91V10 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.46□□□□□ -2.64
Vsx1Q91V10 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.47□□□□□ -2.64
Vsx1Q91V10 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms