Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Mir466l-201ENSMUST00000104866 121 ntBASIC-0.95□□□□□ -2.56
Atg4aQ8C9S8 Snord8-201ENSMUST00000175303 110 ntBASIC-0.95□□□□□ -2.56
Atg4aQ8C9S8 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.95□□□□□ -2.56
Atg4aQ8C9S8 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.95□□□□□ -2.56
Atg4aQ8C9S8 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.96□□□□□ -2.56
Atg4aQ8C9S8 Gm23199-201ENSMUST00000158812 107 ntBASIC-0.96□□□□□ -2.56
Atg4aQ8C9S8 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.96□□□□□ -2.56
Atg4aQ8C9S8 Gm11966-201ENSMUST00000119907 87 ntBASIC-0.97□□□□□ -2.56
Atg4aQ8C9S8 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.97□□□□□ -2.56
Atg4aQ8C9S8 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.97□□□□□ -2.56
Atg4aQ8C9S8 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
Atg4aQ8C9S8 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.99□□□□□ -2.57
Atg4aQ8C9S8 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.99□□□□□ -2.57
Atg4aQ8C9S8 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.99□□□□□ -2.57
Atg4aQ8C9S8 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.99□□□□□ -2.57
Atg4aQ8C9S8 Gm25712-201ENSMUST00000158634 93 ntBASIC-1□□□□□ -2.57
Atg4aQ8C9S8 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.02□□□□□ -2.57
Atg4aQ8C9S8 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.02□□□□□ -2.57
Atg4aQ8C9S8 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.03□□□□□ -2.57
Atg4aQ8C9S8 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.04□□□□□ -2.58
Atg4aQ8C9S8 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.05□□□□□ -2.58
Atg4aQ8C9S8 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.05□□□□□ -2.58
Atg4aQ8C9S8 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.05□□□□□ -2.58
Atg4aQ8C9S8 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.05□□□□□ -2.58
Atg4aQ8C9S8 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.05□□□□□ -2.58
Atg4aQ8C9S8 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.06□□□□□ -2.58
Atg4aQ8C9S8 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.07□□□□□ -2.58
Atg4aQ8C9S8 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.07□□□□□ -2.58
Atg4aQ8C9S8 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.07□□□□□ -2.58
Atg4aQ8C9S8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.07□□□□□ -2.58
Atg4aQ8C9S8 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.07□□□□□ -2.58
Atg4aQ8C9S8 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.08□□□□□ -2.58
Atg4aQ8C9S8 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.08□□□□□ -2.58
Atg4aQ8C9S8 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.08□□□□□ -2.58
Atg4aQ8C9S8 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.08□□□□□ -2.58
Atg4aQ8C9S8 Gm22033-201ENSMUST00000116947 90 ntBASIC-1.09□□□□□ -2.58
Atg4aQ8C9S8 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.09□□□□□ -2.58
Atg4aQ8C9S8 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.11□□□□□ -2.59
Atg4aQ8C9S8 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.11□□□□□ -2.59
Atg4aQ8C9S8 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.12□□□□□ -2.59
Atg4aQ8C9S8 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.12□□□□□ -2.59
Atg4aQ8C9S8 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.12□□□□□ -2.59
Atg4aQ8C9S8 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.12□□□□□ -2.59
Atg4aQ8C9S8 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.13□□□□□ -2.59
Atg4aQ8C9S8 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.14□□□□□ -2.59
Atg4aQ8C9S8 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.15□□□□□ -2.59
Atg4aQ8C9S8 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.15□□□□□ -2.59
Atg4aQ8C9S8 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.16□□□□□ -2.6
Atg4aQ8C9S8 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.16□□□□□ -2.6
Atg4aQ8C9S8 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.16□□□□□ -2.6
Atg4aQ8C9S8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.17□□□□□ -2.6
Atg4aQ8C9S8 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.18□□□□□ -2.6
Atg4aQ8C9S8 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.18□□□□□ -2.6
Atg4aQ8C9S8 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.18□□□□□ -2.6
Atg4aQ8C9S8 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.18□□□□□ -2.6
Atg4aQ8C9S8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.19□□□□□ -2.6
Atg4aQ8C9S8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.19□□□□□ -2.6
Atg4aQ8C9S8 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.2□□□□□ -2.6
Atg4aQ8C9S8 Gm27645-201ENSMUST00000183348 77 ntBASIC-1.2□□□□□ -2.6
Atg4aQ8C9S8 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.2□□□□□ -2.6
Atg4aQ8C9S8 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.21□□□□□ -2.6
Atg4aQ8C9S8 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.22□□□□□ -2.6
Atg4aQ8C9S8 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.22□□□□□ -2.6
Atg4aQ8C9S8 Mir543-201ENSMUST00000102286 76 ntBASIC-1.23□□□□□ -2.61
Atg4aQ8C9S8 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.23□□□□□ -2.61
Atg4aQ8C9S8 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.25□□□□□ -2.61
Atg4aQ8C9S8 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.26□□□□□ -2.61
Atg4aQ8C9S8 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.26□□□□□ -2.61
Atg4aQ8C9S8 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.26□□□□□ -2.61
Atg4aQ8C9S8 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.27□□□□□ -2.61
Atg4aQ8C9S8 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.28□□□□□ -2.61
Atg4aQ8C9S8 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.28□□□□□ -2.61
Atg4aQ8C9S8 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.29□□□□□ -2.62
Atg4aQ8C9S8 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.29□□□□□ -2.62
Atg4aQ8C9S8 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.29□□□□□ -2.62
Atg4aQ8C9S8 Snord123-201ENSMUST00000158692 71 ntBASIC-1.3□□□□□ -2.62
Atg4aQ8C9S8 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.32□□□□□ -2.62
Atg4aQ8C9S8 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.33□□□□□ -2.62
Atg4aQ8C9S8 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.34□□□□□ -2.62
Atg4aQ8C9S8 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.35□□□□□ -2.63
Atg4aQ8C9S8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.35□□□□□ -2.63
Atg4aQ8C9S8 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.36□□□□□ -2.63
Atg4aQ8C9S8 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.36□□□□□ -2.63
Atg4aQ8C9S8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.36□□□□□ -2.63
Atg4aQ8C9S8 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.36□□□□□ -2.63
Atg4aQ8C9S8 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.36□□□□□ -2.63
Atg4aQ8C9S8 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.38□□□□□ -2.63
Atg4aQ8C9S8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
Atg4aQ8C9S8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
Atg4aQ8C9S8 Mir367-201ENSMUST00000083479 75 ntBASIC-1.38□□□□□ -2.63
Atg4aQ8C9S8 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.41□□□□□ -2.64
Atg4aQ8C9S8 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.42□□□□□ -2.64
Atg4aQ8C9S8 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.42□□□□□ -2.64
Atg4aQ8C9S8 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.42□□□□□ -2.64
Atg4aQ8C9S8 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.42□□□□□ -2.64
Atg4aQ8C9S8 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
Atg4aQ8C9S8 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.43□□□□□ -2.64
Atg4aQ8C9S8 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.44□□□□□ -2.64
Atg4aQ8C9S8 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.44□□□□□ -2.64
Atg4aQ8C9S8 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.44□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms