Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm25022-201ENSMUST00000102205 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-1.79□□□□□ -2.7
Smarca1Q6PGB8 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.8□□□□□ -2.7
Smarca1Q6PGB8 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.81□□□□□ -2.7
Smarca1Q6PGB8 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.81□□□□□ -2.7
Smarca1Q6PGB8 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.82□□□□□ -2.7
Smarca1Q6PGB8 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.82□□□□□ -2.7
Smarca1Q6PGB8 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.83□□□□□ -2.7
Smarca1Q6PGB8 Mir494-201ENSMUST00000093632 85 ntBASIC-1.83□□□□□ -2.7
Smarca1Q6PGB8 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.85□□□□□ -2.71
Smarca1Q6PGB8 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.85□□□□□ -2.71
Smarca1Q6PGB8 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.86□□□□□ -2.71
Smarca1Q6PGB8 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.89□□□□□ -2.71
Smarca1Q6PGB8 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.9□□□□□ -2.71
Smarca1Q6PGB8 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.9□□□□□ -2.71
Smarca1Q6PGB8 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.92□□□□□ -2.72
Smarca1Q6PGB8 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
Smarca1Q6PGB8 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
Smarca1Q6PGB8 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.92□□□□□ -2.72
Smarca1Q6PGB8 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.93□□□□□ -2.72
Smarca1Q6PGB8 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.94□□□□□ -2.72
Smarca1Q6PGB8 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.94□□□□□ -2.72
Smarca1Q6PGB8 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.94□□□□□ -2.72
Smarca1Q6PGB8 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.94□□□□□ -2.72
Smarca1Q6PGB8 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.94□□□□□ -2.72
Smarca1Q6PGB8 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.95□□□□□ -2.72
Smarca1Q6PGB8 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.96□□□□□ -2.72
Smarca1Q6PGB8 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.96□□□□□ -2.72
Smarca1Q6PGB8 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.96□□□□□ -2.72
Smarca1Q6PGB8 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.97□□□□□ -2.72
Smarca1Q6PGB8 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.97□□□□□ -2.72
Smarca1Q6PGB8 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.97□□□□□ -2.72
Smarca1Q6PGB8 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.97□□□□□ -2.72
Smarca1Q6PGB8 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.98□□□□□ -2.73
Smarca1Q6PGB8 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.99□□□□□ -2.73
Smarca1Q6PGB8 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.02□□□□□ -2.73
Smarca1Q6PGB8 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.02□□□□□ -2.73
Smarca1Q6PGB8 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.02□□□□□ -2.73
Smarca1Q6PGB8 Gm25648-201ENSMUST00000177844 79 ntBASIC-2.04□□□□□ -2.74
Smarca1Q6PGB8 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.06□□□□□ -2.74
Smarca1Q6PGB8 Gm25326-201ENSMUST00000101903 107 ntBASIC-2.07□□□□□ -2.74
Smarca1Q6PGB8 Gm24331-201ENSMUST00000175099 67 ntBASIC-2.08□□□□□ -2.74
Smarca1Q6PGB8 Gm23801-201ENSMUST00000175561 67 ntBASIC-2.08□□□□□ -2.74
Smarca1Q6PGB8 Gm24485-201ENSMUST00000178283 67 ntBASIC-2.08□□□□□ -2.74
Smarca1Q6PGB8 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-2.1□□□□□ -2.75
Smarca1Q6PGB8 AC161271.1-201ENSMUST00000226914 150 ntBASIC-2.11□□□□□ -2.75
Smarca1Q6PGB8 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.13□□□□□ -2.75
Smarca1Q6PGB8 Gm22965-201ENSMUST00000157958 101 ntBASIC-2.13□□□□□ -2.75
Smarca1Q6PGB8 Gm22746-201ENSMUST00000082494 107 ntBASIC-2.13□□□□□ -2.75
Smarca1Q6PGB8 Gm23573-201ENSMUST00000104408 107 ntBASIC-2.14□□□□□ -2.75
Smarca1Q6PGB8 Gm25847-201ENSMUST00000116793 96 ntBASIC-2.14□□□□□ -2.75
Smarca1Q6PGB8 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.14□□□□□ -2.75
Smarca1Q6PGB8 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.16□□□□□ -2.76
Smarca1Q6PGB8 Gm26051-201ENSMUST00000104642 93 ntBASIC-2.17□□□□□ -2.76
Smarca1Q6PGB8 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.18□□□□□ -2.76
Smarca1Q6PGB8 Mir122-201ENSMUST00000083468 66 ntBASIC-2.18□□□□□ -2.76
Smarca1Q6PGB8 Gm25382-201ENSMUST00000157811 97 ntBASIC-2.2□□□□□ -2.76
Smarca1Q6PGB8 Gm22679-201ENSMUST00000116975 100 ntBASIC-2.21□□□□□ -2.76
Smarca1Q6PGB8 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.22□□□□□ -2.76
Smarca1Q6PGB8 Gm37646-201ENSMUST00000191756 111 ntBASIC-2.22□□□□□ -2.76
Smarca1Q6PGB8 Mir367-201ENSMUST00000083479 75 ntBASIC-2.22□□□□□ -2.76
Smarca1Q6PGB8 Gm26485-201ENSMUST00000158019 64 ntBASIC-2.23□□□□□ -2.77
Smarca1Q6PGB8 Gm23730-201ENSMUST00000083236 107 ntBASIC-2.23□□□□□ -2.77
Smarca1Q6PGB8 Gm24927-201ENSMUST00000083397 107 ntBASIC-2.23□□□□□ -2.77
Smarca1Q6PGB8 Gm24996-201ENSMUST00000158390 99 ntBASIC-2.26□□□□□ -2.77
Smarca1Q6PGB8 Gm24259-201ENSMUST00000083740 107 ntBASIC-2.26□□□□□ -2.77
Smarca1Q6PGB8 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.28□□□□□ -2.77
Smarca1Q6PGB8 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.28□□□□□ -2.77
Smarca1Q6PGB8 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.28□□□□□ -2.77
Smarca1Q6PGB8 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.29□□□□□ -2.78
Smarca1Q6PGB8 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.29□□□□□ -2.78
Smarca1Q6PGB8 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.3□□□□□ -2.78
Smarca1Q6PGB8 Gm22566-201ENSMUST00000175541 85 ntBASIC-2.3□□□□□ -2.78
Smarca1Q6PGB8 Gm23293-201ENSMUST00000082552 104 ntBASIC-2.3□□□□□ -2.78
Smarca1Q6PGB8 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.31□□□□□ -2.78
Smarca1Q6PGB8 Gm22357-201ENSMUST00000082882 83 ntBASIC-2.34□□□□□ -2.78
Smarca1Q6PGB8 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.35□□□□□ -2.79
Smarca1Q6PGB8 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.35□□□□□ -2.79
Smarca1Q6PGB8 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.36□□□□□ -2.79
Smarca1Q6PGB8 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.37□□□□□ -2.79
Smarca1Q6PGB8 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.38□□□□□ -2.79
Smarca1Q6PGB8 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.39□□□□□ -2.79
Smarca1Q6PGB8 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.4□□□□□ -2.79
Smarca1Q6PGB8 Mir192-201ENSMUST00000083589 89 ntBASIC-2.4□□□□□ -2.79
Smarca1Q6PGB8 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.41□□□□□ -2.8
Smarca1Q6PGB8 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.41□□□□□ -2.8
Smarca1Q6PGB8 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.42□□□□□ -2.8
Smarca1Q6PGB8 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.42□□□□□ -2.8
Smarca1Q6PGB8 Mir379-201ENSMUST00000083564 66 ntBASIC-2.42□□□□□ -2.8
Smarca1Q6PGB8 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms