Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.86□□□□□ -2.55
Krt40Q6IFX3 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.86□□□□□ -2.55
Krt40Q6IFX3 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.86□□□□□ -2.55
Krt40Q6IFX3 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.86□□□□□ -2.55
Krt40Q6IFX3 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.86□□□□□ -2.55
Krt40Q6IFX3 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.87□□□□□ -2.55
Krt40Q6IFX3 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.87□□□□□ -2.55
Krt40Q6IFX3 Mir7055-201ENSMUST00000197423 59 ntBASIC-0.87□□□□□ -2.55
Krt40Q6IFX3 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.87□□□□□ -2.55
Krt40Q6IFX3 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.88□□□□□ -2.55
Krt40Q6IFX3 Gm27645-201ENSMUST00000183348 77 ntBASIC-0.88□□□□□ -2.55
Krt40Q6IFX3 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
Krt40Q6IFX3 Gm26485-201ENSMUST00000158019 64 ntBASIC-0.89□□□□□ -2.55
Krt40Q6IFX3 Mir7086-201ENSMUST00000183683 65 ntBASIC-0.89□□□□□ -2.55
Krt40Q6IFX3 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.89□□□□□ -2.55
Krt40Q6IFX3 Snord57-201ENSMUST00000083338 72 ntBASIC-0.89□□□□□ -2.55
Krt40Q6IFX3 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.9□□□□□ -2.55
Krt40Q6IFX3 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.9□□□□□ -2.55
Krt40Q6IFX3 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
Krt40Q6IFX3 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.91□□□□□ -2.56
Krt40Q6IFX3 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.92□□□□□ -2.56
Krt40Q6IFX3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.92□□□□□ -2.56
Krt40Q6IFX3 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.93□□□□□ -2.56
Krt40Q6IFX3 Gm11966-201ENSMUST00000119907 87 ntBASIC-0.93□□□□□ -2.56
Krt40Q6IFX3 Mir6339-201ENSMUST00000185120 117 ntBASIC-0.93□□□□□ -2.56
Krt40Q6IFX3 Gm23974-201ENSMUST00000083321 131 ntBASIC-0.93□□□□□ -2.56
Krt40Q6IFX3 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.93□□□□□ -2.56
Krt40Q6IFX3 Gm22033-201ENSMUST00000116947 90 ntBASIC-0.94□□□□□ -2.56
Krt40Q6IFX3 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.94□□□□□ -2.56
Krt40Q6IFX3 Gm43943-201ENSMUST00000204201 113 ntBASIC-0.94□□□□□ -2.56
Krt40Q6IFX3 Mir543-201ENSMUST00000102286 76 ntBASIC-0.95□□□□□ -2.56
Krt40Q6IFX3 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.95□□□□□ -2.56
Krt40Q6IFX3 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.95□□□□□ -2.56
Krt40Q6IFX3 Mir7218-201ENSMUST00000200050 59 ntBASIC-0.96□□□□□ -2.56
Krt40Q6IFX3 Gm24554-201ENSMUST00000158654 73 ntBASIC-0.97□□□□□ -2.56
Krt40Q6IFX3 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.97□□□□□ -2.56
Krt40Q6IFX3 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.97□□□□□ -2.56
Krt40Q6IFX3 Mir34c-201ENSMUST00000083653 77 ntBASIC-0.98□□□□□ -2.57
Krt40Q6IFX3 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.98□□□□□ -2.57
Krt40Q6IFX3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.99□□□□□ -2.57
Krt40Q6IFX3 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.99□□□□□ -2.57
Krt40Q6IFX3 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.99□□□□□ -2.57
Krt40Q6IFX3 Gm23216-201ENSMUST00000179545 107 ntBASIC-0.99□□□□□ -2.57
Krt40Q6IFX3 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.99□□□□□ -2.57
Krt40Q6IFX3 Gm25087-201ENSMUST00000101992 78 ntBASIC-1□□□□□ -2.57
Krt40Q6IFX3 Gm23785-201ENSMUST00000116741 96 ntBASIC-1□□□□□ -2.57
Krt40Q6IFX3 Gm22965-201ENSMUST00000157958 101 ntBASIC-1□□□□□ -2.57
Krt40Q6IFX3 Gm26467-201ENSMUST00000097257 78 ntBASIC-1□□□□□ -2.57
Krt40Q6IFX3 Snord123-201ENSMUST00000158692 71 ntBASIC-1.02□□□□□ -2.57
Krt40Q6IFX3 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.02□□□□□ -2.57
Krt40Q6IFX3 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.03□□□□□ -2.57
Krt40Q6IFX3 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.03□□□□□ -2.57
Krt40Q6IFX3 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.04□□□□□ -2.58
Krt40Q6IFX3 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.04□□□□□ -2.58
Krt40Q6IFX3 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.04□□□□□ -2.58
Krt40Q6IFX3 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.04□□□□□ -2.58
Krt40Q6IFX3 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.05□□□□□ -2.58
Krt40Q6IFX3 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.06□□□□□ -2.58
Krt40Q6IFX3 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.06□□□□□ -2.58
Krt40Q6IFX3 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.07□□□□□ -2.58
Krt40Q6IFX3 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.07□□□□□ -2.58
Krt40Q6IFX3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.07□□□□□ -2.58
Krt40Q6IFX3 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.08□□□□□ -2.58
Krt40Q6IFX3 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.08□□□□□ -2.58
Krt40Q6IFX3 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.09□□□□□ -2.58
Krt40Q6IFX3 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.09□□□□□ -2.58
Krt40Q6IFX3 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.09□□□□□ -2.58
Krt40Q6IFX3 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.1□□□□□ -2.59
Krt40Q6IFX3 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.11□□□□□ -2.59
Krt40Q6IFX3 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.11□□□□□ -2.59
Krt40Q6IFX3 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.12□□□□□ -2.59
Krt40Q6IFX3 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.12□□□□□ -2.59
Krt40Q6IFX3 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.12□□□□□ -2.59
Krt40Q6IFX3 Gm22071-201ENSMUST00000116857 83 ntBASIC-1.13□□□□□ -2.59
Krt40Q6IFX3 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.13□□□□□ -2.59
Krt40Q6IFX3 Gm25045-201ENSMUST00000122670 99 ntBASIC-1.15□□□□□ -2.59
Krt40Q6IFX3 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.15□□□□□ -2.59
Krt40Q6IFX3 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.16□□□□□ -2.6
Krt40Q6IFX3 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.16□□□□□ -2.6
Krt40Q6IFX3 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.17□□□□□ -2.6
Krt40Q6IFX3 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.17□□□□□ -2.6
Krt40Q6IFX3 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.17□□□□□ -2.6
Krt40Q6IFX3 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.19□□□□□ -2.6
Krt40Q6IFX3 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.19□□□□□ -2.6
Krt40Q6IFX3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
Krt40Q6IFX3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
Krt40Q6IFX3 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.2□□□□□ -2.6
Krt40Q6IFX3 Gm22067-201ENSMUST00000122790 107 ntBASIC-1.21□□□□□ -2.6
Krt40Q6IFX3 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.22□□□□□ -2.6
Krt40Q6IFX3 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.22□□□□□ -2.6
Krt40Q6IFX3 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.22□□□□□ -2.6
Krt40Q6IFX3 Mir367-201ENSMUST00000083479 75 ntBASIC-1.22□□□□□ -2.6
Krt40Q6IFX3 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.24□□□□□ -2.61
Krt40Q6IFX3 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.24□□□□□ -2.61
Krt40Q6IFX3 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.25□□□□□ -2.61
Krt40Q6IFX3 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.26□□□□□ -2.61
Krt40Q6IFX3 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.27□□□□□ -2.61
Krt40Q6IFX3 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.29□□□□□ -2.62
Krt40Q6IFX3 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.3□□□□□ -2.62
Krt40Q6IFX3 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms