Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.09□□□□□ -2.58
Vamp1Q62442 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.1□□□□□ -2.59
Vamp1Q62442 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.1□□□□□ -2.59
Vamp1Q62442 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.1□□□□□ -2.59
Vamp1Q62442 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.11□□□□□ -2.59
Vamp1Q62442 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.11□□□□□ -2.59
Vamp1Q62442 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.11□□□□□ -2.59
Vamp1Q62442 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.11□□□□□ -2.59
Vamp1Q62442 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.12□□□□□ -2.59
Vamp1Q62442 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.13□□□□□ -2.59
Vamp1Q62442 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.14□□□□□ -2.59
Vamp1Q62442 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.14□□□□□ -2.59
Vamp1Q62442 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.15□□□□□ -2.59
Vamp1Q62442 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.17□□□□□ -2.6
Vamp1Q62442 Mir1839-201ENSMUST00000175366 127 ntBASIC-1.18□□□□□ -2.6
Vamp1Q62442 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.18□□□□□ -2.6
Vamp1Q62442 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.18□□□□□ -2.6
Vamp1Q62442 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.2□□□□□ -2.6
Vamp1Q62442 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.21□□□□□ -2.6
Vamp1Q62442 Mir677-202ENSMUST00000197076 78 ntBASIC-1.22□□□□□ -2.6
Vamp1Q62442 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.23□□□□□ -2.61
Vamp1Q62442 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.24□□□□□ -2.61
Vamp1Q62442 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.25□□□□□ -2.61
Vamp1Q62442 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.26□□□□□ -2.61
Vamp1Q62442 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.26□□□□□ -2.61
Vamp1Q62442 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.26□□□□□ -2.61
Vamp1Q62442 Gm23237-201ENSMUST00000104639 92 ntBASIC-1.27□□□□□ -2.61
Vamp1Q62442 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.27□□□□□ -2.61
Vamp1Q62442 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.27□□□□□ -2.61
Vamp1Q62442 Gm23826-201ENSMUST00000157394 119 ntBASIC-1.28□□□□□ -2.61
Vamp1Q62442 Gm22540-201ENSMUST00000158168 117 ntBASIC-1.28□□□□□ -2.61
Vamp1Q62442 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.28□□□□□ -2.61
Vamp1Q62442 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.29□□□□□ -2.62
Vamp1Q62442 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.3□□□□□ -2.62
Vamp1Q62442 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.3□□□□□ -2.62
Vamp1Q62442 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.3□□□□□ -2.62
Vamp1Q62442 Gm22078-201ENSMUST00000157593 103 ntBASIC-1.31□□□□□ -2.62
Vamp1Q62442 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.32□□□□□ -2.62
Vamp1Q62442 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.33□□□□□ -2.62
Vamp1Q62442 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.34□□□□□ -2.62
Vamp1Q62442 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.34□□□□□ -2.62
Vamp1Q62442 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.34□□□□□ -2.62
Vamp1Q62442 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.34□□□□□ -2.62
Vamp1Q62442 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.35□□□□□ -2.63
Vamp1Q62442 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.35□□□□□ -2.63
Vamp1Q62442 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.35□□□□□ -2.63
Vamp1Q62442 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.36□□□□□ -2.63
Vamp1Q62442 Gm22943-201ENSMUST00000158564 76 ntBASIC-1.37□□□□□ -2.63
Vamp1Q62442 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.38□□□□□ -2.63
Vamp1Q62442 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.39□□□□□ -2.63
Vamp1Q62442 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.4□□□□□ -2.63
Vamp1Q62442 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.4□□□□□ -2.63
Vamp1Q62442 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.42□□□□□ -2.64
Vamp1Q62442 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.43□□□□□ -2.64
Vamp1Q62442 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.43□□□□□ -2.64
Vamp1Q62442 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.44□□□□□ -2.64
Vamp1Q62442 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.46□□□□□ -2.64
Vamp1Q62442 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.47□□□□□ -2.64
Vamp1Q62442 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.47□□□□□ -2.64
Vamp1Q62442 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.47□□□□□ -2.64
Vamp1Q62442 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.48□□□□□ -2.65
Vamp1Q62442 Gm25465-201ENSMUST00000157716 105 ntBASIC-1.49□□□□□ -2.65
Vamp1Q62442 Gm25354-201ENSMUST00000179110 105 ntBASIC-1.49□□□□□ -2.65
Vamp1Q62442 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.51□□□□□ -2.65
Vamp1Q62442 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.52□□□□□ -2.65
Vamp1Q62442 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.53□□□□□ -2.65
Vamp1Q62442 Gm24396-201ENSMUST00000116905 93 ntBASIC-1.54□□□□□ -2.66
Vamp1Q62442 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.54□□□□□ -2.66
Vamp1Q62442 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.54□□□□□ -2.66
Vamp1Q62442 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.55□□□□□ -2.66
Vamp1Q62442 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.57□□□□□ -2.66
Vamp1Q62442 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.57□□□□□ -2.66
Vamp1Q62442 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.59□□□□□ -2.66
Vamp1Q62442 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.59□□□□□ -2.66
Vamp1Q62442 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.6□□□□□ -2.67
Vamp1Q62442 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.6□□□□□ -2.67
Vamp1Q62442 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
Vamp1Q62442 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.63□□□□□ -2.67
Vamp1Q62442 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.64□□□□□ -2.67
Vamp1Q62442 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.67□□□□□ -2.68
Vamp1Q62442 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.69□□□□□ -2.68
Vamp1Q62442 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.7□□□□□ -2.68
Vamp1Q62442 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.74□□□□□ -2.69
Vamp1Q62442 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.75□□□□□ -2.69
Vamp1Q62442 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.77□□□□□ -2.69
Vamp1Q62442 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.77□□□□□ -2.69
Vamp1Q62442 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.77□□□□□ -2.69
Vamp1Q62442 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.79□□□□□ -2.7
Vamp1Q62442 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.79□□□□□ -2.7
Vamp1Q62442 Gm25950-201ENSMUST00000175331 100 ntBASIC-1.8□□□□□ -2.7
Vamp1Q62442 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.8□□□□□ -2.7
Vamp1Q62442 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.81□□□□□ -2.7
Vamp1Q62442 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.82□□□□□ -2.7
Vamp1Q62442 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.83□□□□□ -2.7
Vamp1Q62442 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms