Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm25521-201ENSMUST00000158393 108 ntBASIC0.4□□□□□ -2.35
Ecm1Q61508 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.4□□□□□ -2.35
Ecm1Q61508 Mir466b-2-201ENSMUST00000103778 82 ntBASIC0.39□□□□□ -2.35
Ecm1Q61508 Mir8107-201ENSMUST00000184024 117 ntBASIC0.39□□□□□ -2.35
Ecm1Q61508 Gm25254-201ENSMUST00000157239 104 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Gm22088-201ENSMUST00000158341 117 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Mir1839-201ENSMUST00000175366 127 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0.38□□□□□ -2.35
Ecm1Q61508 Gm22313-201ENSMUST00000158008 129 ntBASIC0.37□□□□□ -2.35
Ecm1Q61508 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
Ecm1Q61508 Mir6957-201ENSMUST00000183708 64 ntBASIC0.37□□□□□ -2.35
Ecm1Q61508 Gm44375-201ENSMUST00000196657 150 ntBASIC0.37□□□□□ -2.35
Ecm1Q61508 Gm23556-201ENSMUST00000157821 92 ntBASIC0.36□□□□□ -2.35
Ecm1Q61508 Mir710-201ENSMUST00000102088 110 ntBASIC0.35□□□□□ -2.35
Ecm1Q61508 Mir672-201ENSMUST00000102331 100 ntBASIC0.35□□□□□ -2.35
Ecm1Q61508 Gm27607-201ENSMUST00000185162 122 ntBASIC0.35□□□□□ -2.35
Ecm1Q61508 Mir29b-1-201ENSMUST00000083670 71 ntBASIC0.35□□□□□ -2.35
Ecm1Q61508 Mir1969-201ENSMUST00000157623 94 ntBASIC0.34□□□□□ -2.36
Ecm1Q61508 Gm24833-201ENSMUST00000116775 120 ntBASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm25429-201ENSMUST00000157607 132 ntBASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm25225-201ENSMUST00000158197 102 ntBASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm26210-201ENSMUST00000158680 91 ntBASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm25137-201ENSMUST00000083251 110 ntBASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.33□□□□□ -2.36
Ecm1Q61508 Gm23531-201ENSMUST00000104567 68 ntBASIC0.32□□□□□ -2.36
Ecm1Q61508 Gm23994-201ENSMUST00000158059 88 ntBASIC0.32□□□□□ -2.36
Ecm1Q61508 Gm24455-201ENSMUST00000083348 131 ntBASIC0.32□□□□□ -2.36
Ecm1Q61508 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Ecm1Q61508 Gm26262-201ENSMUST00000158024 127 ntBASIC0.31□□□□□ -2.36
Ecm1Q61508 Gm24003-201ENSMUST00000158455 100 ntBASIC0.31□□□□□ -2.36
Ecm1Q61508 Gm22327-201ENSMUST00000158899 108 ntBASIC0.31□□□□□ -2.36
Ecm1Q61508 Gm25249-201ENSMUST00000175471 78 ntBASIC0.31□□□□□ -2.36
Ecm1Q61508 Gm22573-201ENSMUST00000082982 102 ntBASIC0.31□□□□□ -2.36
Ecm1Q61508 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Ecm1Q61508 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Ecm1Q61508 Gm24775-201ENSMUST00000157377 99 ntBASIC0.27□□□□□ -2.37
Ecm1Q61508 Gm24467-201ENSMUST00000157887 126 ntBASIC0.27□□□□□ -2.37
Ecm1Q61508 Snord85-201ENSMUST00000083262 73 ntBASIC0.27□□□□□ -2.37
Ecm1Q61508 Gm23308-201ENSMUST00000179475 107 ntBASIC0.26□□□□□ -2.37
Ecm1Q61508 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.25□□□□□ -2.37
Ecm1Q61508 Gm25497-201ENSMUST00000104425 132 ntBASIC0.25□□□□□ -2.37
Ecm1Q61508 Gm19248-201ENSMUST00000209404 110 ntBASIC0.25□□□□□ -2.37
Ecm1Q61508 Snord16a-201ENSMUST00000083895 99 ntBASIC0.25□□□□□ -2.37
Ecm1Q61508 Gm25712-201ENSMUST00000158634 93 ntBASIC0.24□□□□□ -2.37
Ecm1Q61508 Gm22013-201ENSMUST00000158788 103 ntBASIC0.24□□□□□ -2.37
Ecm1Q61508 Gm25952-201ENSMUST00000175329 74 ntBASIC0.24□□□□□ -2.37
Ecm1Q61508 Gm25867-201ENSMUST00000158254 103 ntBASIC0.21□□□□□ -2.38
Ecm1Q61508 Gm25601-201ENSMUST00000158356 105 ntBASIC0.21□□□□□ -2.38
Ecm1Q61508 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.2□□□□□ -2.38
Ecm1Q61508 mt-Ts1-201ENSMUST00000082403 69 ntBASIC0.2□□□□□ -2.38
Ecm1Q61508 Gm26124-201ENSMUST00000083359 108 ntBASIC0.19□□□□□ -2.38
Ecm1Q61508 Gm25885-201ENSMUST00000157779 109 ntBASIC0.18□□□□□ -2.38
Ecm1Q61508 Gm24051-201ENSMUST00000158622 75 ntBASIC0.18□□□□□ -2.38
Ecm1Q61508 Gm25472-201ENSMUST00000175454 78 ntBASIC0.18□□□□□ -2.38
Ecm1Q61508 Gm25493-201ENSMUST00000157375 103 ntBASIC0.17□□□□□ -2.38
Ecm1Q61508 Mir7038-201ENSMUST00000184833 71 ntBASIC0.17□□□□□ -2.38
Ecm1Q61508 Gm25032-201ENSMUST00000175411 84 ntBASIC0.16□□□□□ -2.38
Ecm1Q61508 Gm23166-201ENSMUST00000157164 101 ntBASIC0.15□□□□□ -2.39
Ecm1Q61508 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Ecm1Q61508 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Ecm1Q61508 Gm22368-201ENSMUST00000102416 109 ntBASIC0.13□□□□□ -2.39
Ecm1Q61508 Gm25596-201ENSMUST00000178368 107 ntBASIC0.13□□□□□ -2.39
Ecm1Q61508 Gm24714-201ENSMUST00000102382 101 ntBASIC0.12□□□□□ -2.39
Ecm1Q61508 Gm22077-201ENSMUST00000157594 93 ntBASIC0.11□□□□□ -2.39
Ecm1Q61508 Gm22324-201ENSMUST00000158903 114 ntBASIC0.11□□□□□ -2.39
Ecm1Q61508 Mir3089-201ENSMUST00000175350 84 ntBASIC0.1□□□□□ -2.39
Ecm1Q61508 Mir382-201ENSMUST00000083494 76 ntBASIC0.1□□□□□ -2.39
Ecm1Q61508 Gm26043-201ENSMUST00000116912 91 ntBASIC0.09□□□□□ -2.4
Ecm1Q61508 Mir677-202ENSMUST00000197076 78 ntBASIC0.09□□□□□ -2.4
Ecm1Q61508 Gm23428-201ENSMUST00000122488 102 ntBASIC0.08□□□□□ -2.4
Ecm1Q61508 Gm27366-201ENSMUST00000184967 108 ntBASIC0.08□□□□□ -2.4
Ecm1Q61508 Gm24793-201ENSMUST00000104289 132 ntBASIC0.07□□□□□ -2.4
Ecm1Q61508 Gm24903-201ENSMUST00000158131 126 ntBASIC0.07□□□□□ -2.4
Ecm1Q61508 Gm22296-201ENSMUST00000083310 103 ntBASIC0.07□□□□□ -2.4
Ecm1Q61508 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Ecm1Q61508 Gm22813-201ENSMUST00000199948 123 ntBASIC0.06□□□□□ -2.4
Ecm1Q61508 Gm25703-201ENSMUST00000083123 151 ntBASIC0.06□□□□□ -2.4
Ecm1Q61508 Mir493-201ENSMUST00000103837 83 ntBASIC0.05□□□□□ -2.4
Ecm1Q61508 Snora16a-201ENSMUST00000083163 136 ntBASIC0.05□□□□□ -2.4
Ecm1Q61508 Snord123-201ENSMUST00000158692 71 ntBASIC0.04□□□□□ -2.4
Ecm1Q61508 Gm23918-201ENSMUST00000175253 106 ntBASIC0.04□□□□□ -2.4
Ecm1Q61508 Mir378c-201ENSMUST00000184478 99 ntBASIC0.04□□□□□ -2.4
Ecm1Q61508 Gm45374-201ENSMUST00000211388 136 ntBASIC0.03□□□□□ -2.4
Ecm1Q61508 Gm26395-201ENSMUST00000104094 132 ntBASIC0.02□□□□□ -2.41
Ecm1Q61508 Gm23314-201ENSMUST00000157218 107 ntBASIC0.02□□□□□ -2.41
Ecm1Q61508 Gm43943-201ENSMUST00000204201 113 ntBASIC0.02□□□□□ -2.41
Ecm1Q61508 Mir96-201ENSMUST00000083652 106 ntBASIC0.02□□□□□ -2.41
Ecm1Q61508 Mir124a-1-201ENSMUST00000083663 85 ntBASIC0.02□□□□□ -2.41
Ecm1Q61508 Gm23749-201ENSMUST00000104223 131 ntBASIC0.01□□□□□ -2.41
Ecm1Q61508 n-R5s42-201ENSMUST00000082697 104 ntBASIC0.01□□□□□ -2.41
Ecm1Q61508 Gm23248-201ENSMUST00000083367 108 ntBASIC0.01□□□□□ -2.41
Ecm1Q61508 Mir141-201ENSMUST00000083540 72 ntBASIC0.01□□□□□ -2.41
Ecm1Q61508 Gm26008-201ENSMUST00000158797 99 ntBASIC0□□□□□ -2.41
Ecm1Q61508 Mir7057-201ENSMUST00000184685 58 ntBASIC0□□□□□ -2.41
Ecm1Q61508 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.02□□□□□ -2.41
Ecm1Q61508 Gm22464-201ENSMUST00000175273 64 ntBASIC-0.05□□□□□ -2.42
Ecm1Q61508 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.05□□□□□ -2.42
Ecm1Q61508 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms