Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.94□□□□□ -2.72
Usf1Q61069 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.95□□□□□ -2.72
Usf1Q61069 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
Usf1Q61069 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.96□□□□□ -2.72
Usf1Q61069 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.96□□□□□ -2.72
Usf1Q61069 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.97□□□□□ -2.72
Usf1Q61069 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.98□□□□□ -2.73
Usf1Q61069 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.98□□□□□ -2.73
Usf1Q61069 AC160962.3-201ENSMUST00000225914 112 ntBASIC-1.98□□□□□ -2.73
Usf1Q61069 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.98□□□□□ -2.73
Usf1Q61069 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.98□□□□□ -2.73
Usf1Q61069 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.99□□□□□ -2.73
Usf1Q61069 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-1.99□□□□□ -2.73
Usf1Q61069 Gm25326-201ENSMUST00000101903 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm25380-201ENSMUST00000175463 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm24641-201ENSMUST00000178055 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm25484-201ENSMUST00000178217 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm26138-201ENSMUST00000179236 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm22821-201ENSMUST00000179288 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm23298-201ENSMUST00000083181 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm22057-201ENSMUST00000083387 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm25516-201ENSMUST00000083857 107 ntBASIC-2□□□□□ -2.73
Usf1Q61069 Gm24234-201ENSMUST00000104316 107 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Mir466o-201ENSMUST00000104832 84 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Gm25112-201ENSMUST00000122680 104 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Gm23644-201ENSMUST00000157856 77 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Mir3064-201ENSMUST00000175532 67 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Mir485-201ENSMUST00000093620 73 ntBASIC-2.01□□□□□ -2.73
Usf1Q61069 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.01□□□□□ -2.73
Usf1Q61069 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.02□□□□□ -2.73
Usf1Q61069 Gm24605-201ENSMUST00000104772 96 ntBASIC-2.03□□□□□ -2.73
Usf1Q61069 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-2.03□□□□□ -2.73
Usf1Q61069 Mir470-201ENSMUST00000093565 75 ntBASIC-2.03□□□□□ -2.73
Usf1Q61069 Gm22213-201ENSMUST00000157564 119 ntBASIC-2.04□□□□□ -2.74
Usf1Q61069 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.04□□□□□ -2.74
Usf1Q61069 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.04□□□□□ -2.74
Usf1Q61069 Mir192-201ENSMUST00000083589 89 ntBASIC-2.05□□□□□ -2.74
Usf1Q61069 Gm22354-201ENSMUST00000083919 70 ntBASIC-2.05□□□□□ -2.74
Usf1Q61069 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-2.07□□□□□ -2.74
Usf1Q61069 Gm22746-201ENSMUST00000082494 107 ntBASIC-2.07□□□□□ -2.74
Usf1Q61069 Mir351-201ENSMUST00000083569 99 ntBASIC-2.07□□□□□ -2.74
Usf1Q61069 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.08□□□□□ -2.74
Usf1Q61069 Gm44347-201ENSMUST00000199602 108 ntBASIC-2.09□□□□□ -2.74
Usf1Q61069 Gm22357-201ENSMUST00000082882 83 ntBASIC-2.09□□□□□ -2.74
Usf1Q61069 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.09□□□□□ -2.74
Usf1Q61069 Gm26122-201ENSMUST00000083362 82 ntBASIC-2.09□□□□□ -2.74
Usf1Q61069 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-2.1□□□□□ -2.75
Usf1Q61069 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.11□□□□□ -2.75
Usf1Q61069 Gm23811-201ENSMUST00000175155 84 ntBASIC-2.12□□□□□ -2.75
Usf1Q61069 Gm27987-201ENSMUST00000184023 93 ntBASIC-2.12□□□□□ -2.75
Usf1Q61069 AC238676.2-201ENSMUST00000220910 94 ntBASIC-2.12□□□□□ -2.75
Usf1Q61069 Gm22602-201ENSMUST00000157596 95 ntBASIC-2.13□□□□□ -2.75
Usf1Q61069 Gm43206-201ENSMUST00000197990 114 ntBASIC-2.13□□□□□ -2.75
Usf1Q61069 Mir539-201ENSMUST00000102109 74 ntBASIC-2.14□□□□□ -2.75
Usf1Q61069 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.14□□□□□ -2.75
Usf1Q61069 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.15□□□□□ -2.75
Usf1Q61069 Gm22729-201ENSMUST00000158088 129 ntBASIC-2.16□□□□□ -2.76
Usf1Q61069 Gm24674-201ENSMUST00000179194 104 ntBASIC-2.17□□□□□ -2.76
Usf1Q61069 Gm26257-201ENSMUST00000122500 107 ntBASIC-2.18□□□□□ -2.76
Usf1Q61069 Gm23856-201ENSMUST00000158380 99 ntBASIC-2.19□□□□□ -2.76
Usf1Q61069 Gm25648-201ENSMUST00000177844 79 ntBASIC-2.19□□□□□ -2.76
Usf1Q61069 Mir28c-201ENSMUST00000200096 75 ntBASIC-2.19□□□□□ -2.76
Usf1Q61069 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.2□□□□□ -2.76
Usf1Q61069 Mir466q-201ENSMUST00000175249 76 ntBASIC-2.21□□□□□ -2.76
Usf1Q61069 Mir295-201ENSMUST00000104694 69 ntBASIC-2.22□□□□□ -2.76
Usf1Q61069 Gm22965-201ENSMUST00000157958 101 ntBASIC-2.22□□□□□ -2.76
Usf1Q61069 Gm20305-201ENSMUST00000193226 177 ntBASIC-2.22□□□□□ -2.76
Usf1Q61069 Gm24148-201ENSMUST00000082762 80 ntBASIC-2.22□□□□□ -2.76
Usf1Q61069 Gm23376-201ENSMUST00000082938 160 ntBASIC-2.22□□□□□ -2.76
Usf1Q61069 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.24□□□□□ -2.77
Usf1Q61069 Gm24331-201ENSMUST00000175099 67 ntBASIC-2.26□□□□□ -2.77
Usf1Q61069 Gm23801-201ENSMUST00000175561 67 ntBASIC-2.26□□□□□ -2.77
Usf1Q61069 Gm24485-201ENSMUST00000178283 67 ntBASIC-2.26□□□□□ -2.77
Usf1Q61069 Mir7670-201ENSMUST00000183689 69 ntBASIC-2.26□□□□□ -2.77
Usf1Q61069 Gm24185-201ENSMUST00000122578 105 ntBASIC-2.27□□□□□ -2.77
Usf1Q61069 Gm24495-201ENSMUST00000178575 79 ntBASIC-2.28□□□□□ -2.77
Usf1Q61069 Gm22253-201ENSMUST00000179870 79 ntBASIC-2.28□□□□□ -2.77
Usf1Q61069 Gm25987-201ENSMUST00000083234 107 ntBASIC-2.28□□□□□ -2.77
Usf1Q61069 Gm24259-201ENSMUST00000083740 107 ntBASIC-2.28□□□□□ -2.77
Usf1Q61069 Gm22095-201ENSMUST00000158984 150 ntBASIC-2.29□□□□□ -2.78
Usf1Q61069 Gm23730-201ENSMUST00000083236 107 ntBASIC-2.3□□□□□ -2.78
Usf1Q61069 Gm22381-201ENSMUST00000158186 107 ntBASIC-2.31□□□□□ -2.78
Usf1Q61069 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.31□□□□□ -2.78
Usf1Q61069 Gm24996-201ENSMUST00000158390 99 ntBASIC-2.31□□□□□ -2.78
Usf1Q61069 Gm23707-201ENSMUST00000104366 125 ntBASIC-2.32□□□□□ -2.78
Usf1Q61069 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.32□□□□□ -2.78
Usf1Q61069 Gm22313-201ENSMUST00000158008 129 ntBASIC-2.32□□□□□ -2.78
Usf1Q61069 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.33□□□□□ -2.78
Usf1Q61069 Gm24378-201ENSMUST00000122699 106 ntBASIC-2.34□□□□□ -2.78
Usf1Q61069 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.34□□□□□ -2.78
Usf1Q61069 Gm23649-201ENSMUST00000179007 107 ntBASIC-2.34□□□□□ -2.78
Usf1Q61069 Gm25815-201ENSMUST00000082755 107 ntBASIC-2.34□□□□□ -2.78
Usf1Q61069 Mir450b-201ENSMUST00000102095 82 ntBASIC-2.35□□□□□ -2.79
Usf1Q61069 Gm26472-201ENSMUST00000116760 83 ntBASIC-2.35□□□□□ -2.79
Usf1Q61069 Gm25428-201ENSMUST00000157608 114 ntBASIC-2.36□□□□□ -2.79
Usf1Q61069 Mir1950-201ENSMUST00000158526 74 ntBASIC-2.36□□□□□ -2.79
Usf1Q61069 Gm26231-201ENSMUST00000175218 67 ntBASIC-2.36□□□□□ -2.79
Usf1Q61069 Gm25705-201ENSMUST00000083119 104 ntBASIC-2.36□□□□□ -2.79
Usf1Q61069 Gm25779-201ENSMUST00000116710 95 ntBASIC-2.37□□□□□ -2.79
Usf1Q61069 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 200.7 ms