Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.98□□□□□ -2.57
Trim58Q5NCC9 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.98□□□□□ -2.57
Trim58Q5NCC9 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.99□□□□□ -2.57
Trim58Q5NCC9 Gm22013-201ENSMUST00000158788 103 ntBASIC-1□□□□□ -2.57
Trim58Q5NCC9 Gm29344-201ENSMUST00000068143 210 ntBASIC-1□□□□□ -2.57
Trim58Q5NCC9 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1□□□□□ -2.57
Trim58Q5NCC9 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.01□□□□□ -2.57
Trim58Q5NCC9 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.01□□□□□ -2.57
Trim58Q5NCC9 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.01□□□□□ -2.57
Trim58Q5NCC9 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.01□□□□□ -2.57
Trim58Q5NCC9 Mir543-201ENSMUST00000102286 76 ntBASIC-1.02□□□□□ -2.57
Trim58Q5NCC9 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.02□□□□□ -2.57
Trim58Q5NCC9 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.02□□□□□ -2.57
Trim58Q5NCC9 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.02□□□□□ -2.57
Trim58Q5NCC9 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.03□□□□□ -2.57
Trim58Q5NCC9 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.05□□□□□ -2.58
Trim58Q5NCC9 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.06□□□□□ -2.58
Trim58Q5NCC9 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.07□□□□□ -2.58
Trim58Q5NCC9 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.07□□□□□ -2.58
Trim58Q5NCC9 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.09□□□□□ -2.58
Trim58Q5NCC9 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.09□□□□□ -2.58
Trim58Q5NCC9 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.09□□□□□ -2.58
Trim58Q5NCC9 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.1□□□□□ -2.59
Trim58Q5NCC9 Snord8-201ENSMUST00000175303 110 ntBASIC-1.1□□□□□ -2.59
Trim58Q5NCC9 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.11□□□□□ -2.59
Trim58Q5NCC9 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.11□□□□□ -2.59
Trim58Q5NCC9 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.12□□□□□ -2.59
Trim58Q5NCC9 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.12□□□□□ -2.59
Trim58Q5NCC9 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.12□□□□□ -2.59
Trim58Q5NCC9 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.13□□□□□ -2.59
Trim58Q5NCC9 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.13□□□□□ -2.59
Trim58Q5NCC9 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.15□□□□□ -2.59
Trim58Q5NCC9 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.15□□□□□ -2.59
Trim58Q5NCC9 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.15□□□□□ -2.59
Trim58Q5NCC9 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.16□□□□□ -2.6
Trim58Q5NCC9 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.16□□□□□ -2.6
Trim58Q5NCC9 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.16□□□□□ -2.6
Trim58Q5NCC9 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.17□□□□□ -2.6
Trim58Q5NCC9 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.17□□□□□ -2.6
Trim58Q5NCC9 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.17□□□□□ -2.6
Trim58Q5NCC9 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.17□□□□□ -2.6
Trim58Q5NCC9 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.17□□□□□ -2.6
Trim58Q5NCC9 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.18□□□□□ -2.6
Trim58Q5NCC9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
Trim58Q5NCC9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
Trim58Q5NCC9 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.18□□□□□ -2.6
Trim58Q5NCC9 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.19□□□□□ -2.6
Trim58Q5NCC9 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.2□□□□□ -2.6
Trim58Q5NCC9 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
Trim58Q5NCC9 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.22□□□□□ -2.6
Trim58Q5NCC9 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.23□□□□□ -2.61
Trim58Q5NCC9 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.23□□□□□ -2.61
Trim58Q5NCC9 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.23□□□□□ -2.61
Trim58Q5NCC9 Mir367-201ENSMUST00000083479 75 ntBASIC-1.23□□□□□ -2.61
Trim58Q5NCC9 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.24□□□□□ -2.61
Trim58Q5NCC9 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.24□□□□□ -2.61
Trim58Q5NCC9 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.24□□□□□ -2.61
Trim58Q5NCC9 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.24□□□□□ -2.61
Trim58Q5NCC9 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.25□□□□□ -2.61
Trim58Q5NCC9 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.27□□□□□ -2.61
Trim58Q5NCC9 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.27□□□□□ -2.61
Trim58Q5NCC9 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.27□□□□□ -2.61
Trim58Q5NCC9 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.27□□□□□ -2.61
Trim58Q5NCC9 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.28□□□□□ -2.61
Trim58Q5NCC9 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.28□□□□□ -2.61
Trim58Q5NCC9 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.28□□□□□ -2.61
Trim58Q5NCC9 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.28□□□□□ -2.61
Trim58Q5NCC9 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.29□□□□□ -2.62
Trim58Q5NCC9 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.29□□□□□ -2.62
Trim58Q5NCC9 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.3□□□□□ -2.62
Trim58Q5NCC9 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.3□□□□□ -2.62
Trim58Q5NCC9 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.31□□□□□ -2.62
Trim58Q5NCC9 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.31□□□□□ -2.62
Trim58Q5NCC9 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.31□□□□□ -2.62
Trim58Q5NCC9 Mir539-201ENSMUST00000102109 74 ntBASIC-1.32□□□□□ -2.62
Trim58Q5NCC9 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.32□□□□□ -2.62
Trim58Q5NCC9 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.32□□□□□ -2.62
Trim58Q5NCC9 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.32□□□□□ -2.62
Trim58Q5NCC9 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.33□□□□□ -2.62
Trim58Q5NCC9 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.33□□□□□ -2.62
Trim58Q5NCC9 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.33□□□□□ -2.62
Trim58Q5NCC9 Mir122-201ENSMUST00000083468 66 ntBASIC-1.33□□□□□ -2.62
Trim58Q5NCC9 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.34□□□□□ -2.62
Trim58Q5NCC9 Mir192-201ENSMUST00000083589 89 ntBASIC-1.34□□□□□ -2.62
Trim58Q5NCC9 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.35□□□□□ -2.63
Trim58Q5NCC9 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.36□□□□□ -2.63
Trim58Q5NCC9 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.37□□□□□ -2.63
Trim58Q5NCC9 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.37□□□□□ -2.63
Trim58Q5NCC9 Mir295-201ENSMUST00000104694 69 ntBASIC-1.39□□□□□ -2.63
Trim58Q5NCC9 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms