Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25183-201ENSMUST00000157752 106 ntBASIC-5.79□□□□□ -3.34
Ccdc88bQ4QRL3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-5.79□□□□□ -3.34
Ccdc88bQ4QRL3 Gm25753-201ENSMUST00000116792 121 ntBASIC-5.81□□□□□ -3.34
Ccdc88bQ4QRL3 Gm26253-201ENSMUST00000122493 103 ntBASIC-5.82□□□□□ -3.34
Ccdc88bQ4QRL3 Gm25289-201ENSMUST00000122799 119 ntBASIC-5.82□□□□□ -3.34
Ccdc88bQ4QRL3 Gm27845-201ENSMUST00000184479 114 ntBASIC-5.83□□□□□ -3.34
Ccdc88bQ4QRL3 Gm26225-201ENSMUST00000082508 135 ntBASIC-5.83□□□□□ -3.34
Ccdc88bQ4QRL3 Gm24378-201ENSMUST00000122699 106 ntBASIC-5.83□□□□□ -3.34
Ccdc88bQ4QRL3 Gm24387-201ENSMUST00000104625 90 ntBASIC-5.84□□□□□ -3.34
Ccdc88bQ4QRL3 Gm23434-201ENSMUST00000157179 100 ntBASIC-5.84□□□□□ -3.34
Ccdc88bQ4QRL3 Mir1898-201ENSMUST00000122643 83 ntBASIC-5.85□□□□□ -3.35
Ccdc88bQ4QRL3 Gm25521-201ENSMUST00000158393 108 ntBASIC-5.86□□□□□ -3.35
Ccdc88bQ4QRL3 Gm27987-201ENSMUST00000184023 93 ntBASIC-5.9□□□□□ -3.35
Ccdc88bQ4QRL3 Gm27450-201ENSMUST00000104632 90 ntBASIC-5.91□□□□□ -3.36
Ccdc88bQ4QRL3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC-5.92□□□□□ -3.36
Ccdc88bQ4QRL3 Gm22555-201ENSMUST00000157801 62 ntBASIC-5.92□□□□□ -3.36
Ccdc88bQ4QRL3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-5.93□□□□□ -3.36
Ccdc88bQ4QRL3 Gm22490-201ENSMUST00000157188 119 ntBASIC-5.95□□□□□ -3.36
Ccdc88bQ4QRL3 Gm27694-201ENSMUST00000184740 86 ntBASIC-5.95□□□□□ -3.36
Ccdc88bQ4QRL3 CT010505.1-201ENSMUST00000227026 396 ntBASIC-5.96□□□□□ -3.36
Ccdc88bQ4QRL3 Gm23376-201ENSMUST00000082938 160 ntBASIC-5.97□□□□□ -3.37
Ccdc88bQ4QRL3 Gm22885-201ENSMUST00000157410 107 ntBASIC-5.98□□□□□ -3.37
Ccdc88bQ4QRL3 Gm27317-201ENSMUST00000183533 95 ntBASIC-5.98□□□□□ -3.37
Ccdc88bQ4QRL3 Gm22095-201ENSMUST00000158984 150 ntBASIC-5.99□□□□□ -3.37
Ccdc88bQ4QRL3 Gm24710-201ENSMUST00000175235 101 ntBASIC-5.99□□□□□ -3.37
Ccdc88bQ4QRL3 Gm24135-201ENSMUST00000179085 101 ntBASIC-5.99□□□□□ -3.37
Ccdc88bQ4QRL3 Gm24495-201ENSMUST00000178575 79 ntBASIC-6□□□□□ -3.37
Ccdc88bQ4QRL3 Gm22253-201ENSMUST00000179870 79 ntBASIC-6□□□□□ -3.37
Ccdc88bQ4QRL3 Gm22255-201ENSMUST00000177933 79 ntBASIC-6.02□□□□□ -3.37
Ccdc88bQ4QRL3 Gm23254-201ENSMUST00000097244 79 ntBASIC-6.02□□□□□ -3.37
Ccdc88bQ4QRL3 Gm24106-201ENSMUST00000175498 127 ntBASIC-6.05□□□□□ -3.38
Ccdc88bQ4QRL3 Gm26139-201ENSMUST00000180098 107 ntBASIC-6.07□□□□□ -3.38
Ccdc88bQ4QRL3 Gm25254-201ENSMUST00000157239 104 ntBASIC-6.09□□□□□ -3.38
Ccdc88bQ4QRL3 Gm24916-201ENSMUST00000157287 79 ntBASIC-6.09□□□□□ -3.38
Ccdc88bQ4QRL3 Gm25039-201ENSMUST00000082933 107 ntBASIC-6.09□□□□□ -3.38
Ccdc88bQ4QRL3 Mir7681-201ENSMUST00000184834 72 ntBASIC-6.1□□□□□ -3.39
Ccdc88bQ4QRL3 Gm25222-201ENSMUST00000158199 126 ntBASIC-6.13□□□□□ -3.39
Ccdc88bQ4QRL3 AC157278.1-201ENSMUST00000221621 148 ntBASIC-6.13□□□□□ -3.39
Ccdc88bQ4QRL3 Mir3083-201ENSMUST00000175377 64 ntBASIC-6.14□□□□□ -3.39
Ccdc88bQ4QRL3 Gm24674-201ENSMUST00000179194 104 ntBASIC-6.14□□□□□ -3.39
Ccdc88bQ4QRL3 Gm25465-201ENSMUST00000157716 105 ntBASIC-6.15□□□□□ -3.39
Ccdc88bQ4QRL3 Gm24498-201ENSMUST00000158445 102 ntBASIC-6.15□□□□□ -3.39
Ccdc88bQ4QRL3 Gm44470-201ENSMUST00000203913 142 ntBASIC-6.16□□□□□ -3.4
Ccdc88bQ4QRL3 Mir466-201ENSMUST00000093591 73 ntBASIC-6.17□□□□□ -3.4
Ccdc88bQ4QRL3 Gm22491-201ENSMUST00000157190 102 ntBASIC-6.19□□□□□ -3.4
Ccdc88bQ4QRL3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-6.19□□□□□ -3.4
Ccdc88bQ4QRL3 Gm24226-201ENSMUST00000158826 97 ntBASIC-6.22□□□□□ -3.4
Ccdc88bQ4QRL3 Gm24926-201ENSMUST00000178053 79 ntBASIC-6.22□□□□□ -3.41
Ccdc88bQ4QRL3 Gm22632-201ENSMUST00000178266 79 ntBASIC-6.22□□□□□ -3.41
Ccdc88bQ4QRL3 Gm23922-201ENSMUST00000178792 79 ntBASIC-6.27□□□□□ -3.41
Ccdc88bQ4QRL3 Gm24657-201ENSMUST00000180085 79 ntBASIC-6.27□□□□□ -3.41
Ccdc88bQ4QRL3 Gm22996-201ENSMUST00000180236 79 ntBASIC-6.27□□□□□ -3.41
Ccdc88bQ4QRL3 Gm26227-201ENSMUST00000082510 101 ntBASIC-6.27□□□□□ -3.41
Ccdc88bQ4QRL3 Gm22039-201ENSMUST00000157278 132 ntBASIC-6.28□□□□□ -3.42
Ccdc88bQ4QRL3 Gm43505-201ENSMUST00000200579 139 ntBASIC-6.3□□□□□ -3.42
Ccdc88bQ4QRL3 Gm24035-201ENSMUST00000082867 107 ntBASIC-6.32□□□□□ -3.42
Ccdc88bQ4QRL3 Gm29107-201ENSMUST00000190910 347 ntBASIC-6.33□□□□□ -3.42
Ccdc88bQ4QRL3 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-6.34□□□□□ -3.42
Ccdc88bQ4QRL3 Gm22354-201ENSMUST00000083919 70 ntBASIC-6.35□□□□□ -3.43
Ccdc88bQ4QRL3 Gm22080-201ENSMUST00000157591 106 ntBASIC-6.36□□□□□ -3.43
Ccdc88bQ4QRL3 Mir1950-201ENSMUST00000158526 74 ntBASIC-6.37□□□□□ -3.43
Ccdc88bQ4QRL3 Gm26485-201ENSMUST00000158019 64 ntBASIC-6.38□□□□□ -3.43
Ccdc88bQ4QRL3 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-6.39□□□□□ -3.43
Ccdc88bQ4QRL3 Gm11966-201ENSMUST00000119907 87 ntBASIC-6.41□□□□□ -3.44
Ccdc88bQ4QRL3 Gm23059-201ENSMUST00000158978 107 ntBASIC-6.42□□□□□ -3.44
Ccdc88bQ4QRL3 Gm22474-201ENSMUST00000179407 107 ntBASIC-6.44□□□□□ -3.44
Ccdc88bQ4QRL3 Gm44303-201ENSMUST00000196348 83 ntBASIC-6.45□□□□□ -3.44
Ccdc88bQ4QRL3 Gm25920-201ENSMUST00000158307 99 ntBASIC-6.48□□□□□ -3.45
Ccdc88bQ4QRL3 Gm23678-201ENSMUST00000083157 107 ntBASIC-6.5□□□□□ -3.45
Ccdc88bQ4QRL3 Snord70-201ENSMUST00000104157 87 ntBASIC-6.51□□□□□ -3.45
Ccdc88bQ4QRL3 Gm14837-201ENSMUST00000119688 206 ntBASIC-6.51□□□□□ -3.45
Ccdc88bQ4QRL3 Snord47-201ENSMUST00000083034 77 ntBASIC-6.51□□□□□ -3.45
Ccdc88bQ4QRL3 mt-Tf-201ENSMUST00000082387 68 ntBASIC-6.53□□□□□ -3.45
Ccdc88bQ4QRL3 Gm23044-201ENSMUST00000157891 100 ntBASIC-6.53□□□□□ -3.46
Ccdc88bQ4QRL3 Gm22301-201ENSMUST00000082656 107 ntBASIC-6.54□□□□□ -3.46
Ccdc88bQ4QRL3 Gm23244-201ENSMUST00000083375 92 ntBASIC-6.55□□□□□ -3.46
Ccdc88bQ4QRL3 Gm24410-201ENSMUST00000083433 107 ntBASIC-6.56□□□□□ -3.46
Ccdc88bQ4QRL3 Gm22550-201ENSMUST00000179774 107 ntBASIC-6.58□□□□□ -3.46
Ccdc88bQ4QRL3 Gm22060-201ENSMUST00000082558 107 ntBASIC-6.58□□□□□ -3.46
Ccdc88bQ4QRL3 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-6.59□□□□□ -3.46
Ccdc88bQ4QRL3 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-6.59□□□□□ -3.46
Ccdc88bQ4QRL3 Gm24194-201ENSMUST00000116805 90 ntBASIC-6.61□□□□□ -3.47
Ccdc88bQ4QRL3 Gm22078-201ENSMUST00000157593 103 ntBASIC-6.61□□□□□ -3.47
Ccdc88bQ4QRL3 Gm24211-201ENSMUST00000158264 107 ntBASIC-6.61□□□□□ -3.47
Ccdc88bQ4QRL3 Gm22729-201ENSMUST00000158088 129 ntBASIC-6.63□□□□□ -3.47
Ccdc88bQ4QRL3 Mir1187-201ENSMUST00000116936 122 ntBASIC-6.66□□□□□ -3.47
Ccdc88bQ4QRL3 Gm26159-201ENSMUST00000158968 104 ntBASIC-6.66□□□□□ -3.47
Ccdc88bQ4QRL3 Gm27332-201ENSMUST00000184893 112 ntBASIC-6.66□□□□□ -3.47
Ccdc88bQ4QRL3 Mir466h-201ENSMUST00000104748 81 ntBASIC-6.69□□□□□ -3.48
Ccdc88bQ4QRL3 Gm24750-201ENSMUST00000157843 104 ntBASIC-6.69□□□□□ -3.48
Ccdc88bQ4QRL3 Gm26194-201ENSMUST00000175036 71 ntBASIC-6.7□□□□□ -3.48
Ccdc88bQ4QRL3 Gm22127-201ENSMUST00000083239 106 ntBASIC-6.7□□□□□ -3.48
Ccdc88bQ4QRL3 Gm24457-201ENSMUST00000083196 105 ntBASIC-6.71□□□□□ -3.48
Ccdc88bQ4QRL3 Gm25071-201ENSMUST00000175232 70 ntBASIC-6.72□□□□□ -3.48
Ccdc88bQ4QRL3 Gm25414-201ENSMUST00000101814 107 ntBASIC-6.73□□□□□ -3.49
Ccdc88bQ4QRL3 Gm10813-201ENSMUST00000099936 90 ntBASIC-6.73□□□□□ -3.49
Ccdc88bQ4QRL3 Gm23785-201ENSMUST00000116741 96 ntBASIC-6.75□□□□□ -3.49
Ccdc88bQ4QRL3 Gm37746-201ENSMUST00000193249 198 ntBASIC-6.77□□□□□ -3.49
Ccdc88bQ4QRL3 Gm44859-201ENSMUST00000207831 94 ntBASIC-6.77□□□□□ -3.49
Ccdc88bQ4QRL3 AC164561.1-201ENSMUST00000220414 115 ntBASIC-6.77□□□□□ -3.49
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms