Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.45□□□□□ -2.64
Trim40Q3UWA4 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.45□□□□□ -2.64
Trim40Q3UWA4 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.45□□□□□ -2.64
Trim40Q3UWA4 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.46□□□□□ -2.64
Trim40Q3UWA4 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.46□□□□□ -2.64
Trim40Q3UWA4 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.46□□□□□ -2.64
Trim40Q3UWA4 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.46□□□□□ -2.64
Trim40Q3UWA4 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.46□□□□□ -2.64
Trim40Q3UWA4 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.47□□□□□ -2.64
Trim40Q3UWA4 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.47□□□□□ -2.64
Trim40Q3UWA4 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.48□□□□□ -2.65
Trim40Q3UWA4 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.48□□□□□ -2.65
Trim40Q3UWA4 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.49□□□□□ -2.65
Trim40Q3UWA4 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.49□□□□□ -2.65
Trim40Q3UWA4 Snord8-201ENSMUST00000175303 110 ntBASIC-1.5□□□□□ -2.65
Trim40Q3UWA4 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.5□□□□□ -2.65
Trim40Q3UWA4 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.51□□□□□ -2.65
Trim40Q3UWA4 Gm22679-201ENSMUST00000116975 100 ntBASIC-1.53□□□□□ -2.65
Trim40Q3UWA4 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.54□□□□□ -2.66
Trim40Q3UWA4 Snord123-201ENSMUST00000158692 71 ntBASIC-1.54□□□□□ -2.66
Trim40Q3UWA4 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.56□□□□□ -2.66
Trim40Q3UWA4 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.57□□□□□ -2.66
Trim40Q3UWA4 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.57□□□□□ -2.66
Trim40Q3UWA4 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.57□□□□□ -2.66
Trim40Q3UWA4 Mir543-201ENSMUST00000102286 76 ntBASIC-1.58□□□□□ -2.66
Trim40Q3UWA4 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.59□□□□□ -2.66
Trim40Q3UWA4 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.61□□□□□ -2.67
Trim40Q3UWA4 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.62□□□□□ -2.67
Trim40Q3UWA4 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.62□□□□□ -2.67
Trim40Q3UWA4 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.63□□□□□ -2.67
Trim40Q3UWA4 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.63□□□□□ -2.67
Trim40Q3UWA4 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.64□□□□□ -2.67
Trim40Q3UWA4 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.64□□□□□ -2.67
Trim40Q3UWA4 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.65□□□□□ -2.67
Trim40Q3UWA4 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.65□□□□□ -2.67
Trim40Q3UWA4 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.65□□□□□ -2.67
Trim40Q3UWA4 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.66□□□□□ -2.68
Trim40Q3UWA4 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.66□□□□□ -2.68
Trim40Q3UWA4 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.66□□□□□ -2.68
Trim40Q3UWA4 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.67□□□□□ -2.68
Trim40Q3UWA4 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.68□□□□□ -2.68
Trim40Q3UWA4 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.68□□□□□ -2.68
Trim40Q3UWA4 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.68□□□□□ -2.68
Trim40Q3UWA4 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.68□□□□□ -2.68
Trim40Q3UWA4 Mir367-201ENSMUST00000083479 75 ntBASIC-1.69□□□□□ -2.68
Trim40Q3UWA4 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.7□□□□□ -2.68
Trim40Q3UWA4 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.71□□□□□ -2.68
Trim40Q3UWA4 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.72□□□□□ -2.68
Trim40Q3UWA4 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.73□□□□□ -2.69
Trim40Q3UWA4 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.73□□□□□ -2.69
Trim40Q3UWA4 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.73□□□□□ -2.69
Trim40Q3UWA4 Gm25652-201ENSMUST00000083780 103 ntBASIC-1.73□□□□□ -2.69
Trim40Q3UWA4 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.74□□□□□ -2.69
Trim40Q3UWA4 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.74□□□□□ -2.69
Trim40Q3UWA4 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.74□□□□□ -2.69
Trim40Q3UWA4 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.74□□□□□ -2.69
Trim40Q3UWA4 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.74□□□□□ -2.69
Trim40Q3UWA4 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.75□□□□□ -2.69
Trim40Q3UWA4 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.76□□□□□ -2.69
Trim40Q3UWA4 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.76□□□□□ -2.69
Trim40Q3UWA4 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-1.77□□□□□ -2.69
Trim40Q3UWA4 Gm24673-201ENSMUST00000116948 124 ntBASIC-1.77□□□□□ -2.69
Trim40Q3UWA4 Gm23108-201ENSMUST00000178295 124 ntBASIC-1.77□□□□□ -2.69
Trim40Q3UWA4 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.78□□□□□ -2.69
Trim40Q3UWA4 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.78□□□□□ -2.69
Trim40Q3UWA4 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.79□□□□□ -2.7
Trim40Q3UWA4 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.79□□□□□ -2.7
Trim40Q3UWA4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-1.81□□□□□ -2.7
Trim40Q3UWA4 Mir466l-201ENSMUST00000104866 121 ntBASIC-1.82□□□□□ -2.7
Trim40Q3UWA4 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.82□□□□□ -2.7
Trim40Q3UWA4 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.83□□□□□ -2.7
Trim40Q3UWA4 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.84□□□□□ -2.7
Trim40Q3UWA4 Gm26139-201ENSMUST00000180098 107 ntBASIC-1.84□□□□□ -2.7
Trim40Q3UWA4 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.85□□□□□ -2.71
Trim40Q3UWA4 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.86□□□□□ -2.71
Trim40Q3UWA4 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.86□□□□□ -2.71
Trim40Q3UWA4 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
Trim40Q3UWA4 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
Trim40Q3UWA4 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.87□□□□□ -2.71
Trim40Q3UWA4 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.87□□□□□ -2.71
Trim40Q3UWA4 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.88□□□□□ -2.71
Trim40Q3UWA4 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.88□□□□□ -2.71
Trim40Q3UWA4 Gm22039-201ENSMUST00000157278 132 ntBASIC-1.91□□□□□ -2.72
Trim40Q3UWA4 Mir295-201ENSMUST00000104694 69 ntBASIC-1.92□□□□□ -2.72
Trim40Q3UWA4 Mir34c-201ENSMUST00000083653 77 ntBASIC-1.92□□□□□ -2.72
Trim40Q3UWA4 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.93□□□□□ -2.72
Trim40Q3UWA4 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.93□□□□□ -2.72
Trim40Q3UWA4 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.95□□□□□ -2.72
Trim40Q3UWA4 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.96□□□□□ -2.72
Trim40Q3UWA4 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.96□□□□□ -2.72
Trim40Q3UWA4 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.97□□□□□ -2.72
Trim40Q3UWA4 Mir122-201ENSMUST00000083468 66 ntBASIC-1.97□□□□□ -2.72
Trim40Q3UWA4 Mir192-201ENSMUST00000083589 89 ntBASIC-1.97□□□□□ -2.72
Trim40Q3UWA4 Gm25465-201ENSMUST00000157716 105 ntBASIC-2□□□□□ -2.73
Trim40Q3UWA4 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.01□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 232.1 ms